Solanum lycopersicum (tomato): 101262208
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Entry
101262208 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101262208
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101262208
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
SpaA
Motif
Other DBs
NCBI-GeneID:
101262208
NCBI-ProteinID:
XP_069153467
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Position
4:complement(63384667..63392209)
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AA seq
670 aa
AA seq
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MGNGRRFKRMIKCLLCACAGQTGGRCHSGGSGTMSPIGVRLYIQDRHVMMDNGLVQVTLS
NPDGIVTGIRYNDVDNLLEGLNDESNRGYWDVVWNSPDGGKTGVFEVIKGTNFKVIKETD
DQVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSSEWPAFSIGETR
IAFKLRKDKFHYMAVADNKQRFMPLPDDRMPARCQRLAYAEAVLLNNPVEPELRGEVDDK
YQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHY
AGDDLTPNFAQGEAWKKVFGPVFIYLNSVMPGEDPVTLWDDAKIQMQREVQSWPYSFPVS
EDFPSADQRGSVSGKLLVQDKYISDDHITANGAYVGLAPPGEAGSWQKECKDYQFWAKSD
NNGNFSINNIRPGDYKLYAWVPGFIGDYLYETPISITPGCSIDVDEIVYQPPRDGPTLWE
IGIPDRTAAEFFVPEPNPKFVNKLFVNHPDRFRQYGLWDRYSELYPTDDLVYVTGESDYT
KDWFFAQVPRRKEDGSYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNNPST
NRPVFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRNQSPFQGIMY
DYIRLEAPPN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgggcgtcgcttcaaacgcatgataaaatgcttattatgcgcgtgcgctgga
caaacaggaggtcgttgtcatagtggaggctctggaacaatgtccccaattggagtgaga
ctgtacattcaggatcgccatgtgatgatggataatggcctagtacaagtcacgttatca
aatccagatggaattgtcactggaatacgctataatgacgttgataatctacttgaaggc
cttaacgatgaatctaatagagggtactgggacgttgtctggaattctcccgatggtgga
aaaactggagtatttgaagtgatcaagggtactaatttcaaggttataaaggagacagac
gatcaagtagagatatcgttttcgcgaccatgggatccctccctccaaggcaaacttgtg
cctctgaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcttat
gccatttacgagcatgttggttcatctgagtggcctgctttcagcatcggtgaaacaaga
atagcattcaagctccggaaagacaagtttcactatatggctgtggcagacaataagcaa
agattcatgcctctaccagatgaccgaatgcctgcaagatgccaacgccttgcctatgca
gaagcggtccttctgaataatcctgtggagccagagttaagaggagaggtcgatgacaag
taccaatattcatgtgataataaagacaacaaggtccacggctggatatctatggatcca
cctgtgggattctggcaaattactccaagtgatgaatttcgatccggtggacctgtcaaa
cagaacctcacatctcatgtcggtccaactaccttagctatgtttctaagctctcattac
gctggggatgatctaacaccaaattttgctcaaggtgaagcctggaagaaagtttttggc
cccgtgtttatatatctcaattctgttatgccaggggaagatcctgttactctatgggat
gatgccaagatacagatgcagcgtgaagttcaaagttggccttacagttttccagtatct
gaggattttccatcagcagatcaaagaggcagtgttagcggtaaacttttggttcaagac
aagtacattagtgatgatcatataactgcaaatggcgcttatgtcggccttgctccgcca
ggagaagctggttcctggcaaaaagaatgcaaggactaccaattttgggctaaatcagac
aacaatggaaacttctccataaacaatatacgtcctggtgactacaaactttatgcatgg
gtacctggattcattggggactatctatatgagactcctatttccataactccaggttgt
agtattgatgtggacgaaatcgtatatcagcctccaagagatggcccaacattatgggaa
ataggcattcctgatcgtactgctgctgaattttttgttcctgaacccaacccgaaattt
gtcaacaagcttttcgtcaatcatcccgacaggtttaggcaatatggattgtgggatagg
tactccgagctatatccaacggatgatcttgtgtatgtaactggagaaagtgactatacc
aaagactggtttttcgctcaggttccaaggagaaaagaggacggctcatatcaaggaacg
acatggcaaatcagatttaaacttgattcagtcaatcaaggaggcacgtataaattgcgt
attgcaattgcatctgcaactttagctgaagtacaggttcgggtgaataatccaagcaca
aatcgacctgtattttcaaccggattgattggaagagacaactcaattgctagacacgga
attcacggattatattggctatacaatatagacatacagggaaatctgttagtacaaggg
gacaacaccatttacttaggccaaccaagaaaccaaagtcctttccaggggattatgtat
gactatattcgtctcgaagctccaccaaactaa
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