Solanum lycopersicum (tomato): 101262344
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Entry
101262344 CDS
T02665
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101262344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101262344
04121 Ubiquitin system [BR:
sly04121
]
101262344
03029 Mitochondrial biogenesis [BR:
sly03029
]
101262344
Membrane trafficking [BR:
sly04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
101262344
Ubiquitin system [BR:
sly04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
101262344
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101262344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
101262344
NCBI-ProteinID:
XP_004246994
UniProt:
A0A3Q7I0K5
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All DBs
Position
9:31410439..31416697
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AA seq
236 aa
AA seq
DB search
MTSISSSWDGTITSTQFHNAASTFSEIWNNFDLGFPHWSWINFPNKPGFAATKLQGYLSL
ENMILPITTEEECVLAGTEDLTCSNEDSFDDTAILVQKDSKERHHYDFHVIYSSSFRVPV
LYFRAYCSDGEPLAIEDLEKDFPAYTAQELAVSKWTFITREEHPYLNRPWYTLHPCGTSE
WMKLLFSNEPSVVNQGGVAIEKYLTSWFSVVSPVFGFKIPLKFSTFMNSGNVATVI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatctcctcctcatgggatggcactattacctccactcaatttcacaatgct
gcttctactttttctgagatatggaacaactttgatctagggtttcctcactggtcatgg
atcaactttccaaataaaccaggttttgctgctaccaagctacaaggatatttatcattg
gagaatatgattcttcccataacaactgaggaagaatgtgttctagctggaacagaagat
ttgacttgctctaacgaagattcatttgatgatactgccatattggttcaaaaggacagc
aaagaaagacatcattacgactttcatgtcatctacagttcctcttttagggttccagta
ctttatttccgtgcatactgcagtgatggagaacccttggcaatagaagacctggaaaag
gactttcctgcctatactgcgcaggaactggcagtatctaaatggacctttattactcgg
gaggagcacccgtacctgaatcggccatggtacacattgcatccatgtgggactagtgag
tggatgaagctgcttttcagtaatgaaccttcagttgtgaatcaaggtggagttgcaatt
gagaaatatctaacctcatggttttcagttgtatcacctgtctttggttttaaaatcccc
ttaaaattctctacatttatgaactctggaaatgttgctactgtaatatag
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