Solanum lycopersicum (tomato): 101262837
Help
Entry
101262837 CDS
T02665
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101262837
Membrane trafficking [BR:
sly04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101262837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
101262837
NCBI-ProteinID:
XP_010324735
LinkDB
All DBs
Position
8:complement(7312687..7362370)
Genome browser
AA seq
1836 aa
AA seq
DB search
METSSSGYRFRRIPHHSFAGSLNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPTSFQSQIYEGPDTDIETEMHLANARRPKIEDSVDGEIPSTSGAQLSEDNFSDLSNA
KVSKHFGESPLPTYEPVFDWENERSLIFGQRIPEAHMSQYTSGLKIAVKVLSLSFQAGLV
EPFHGTICLYNRERREKLSEDFIFHVLPTEMQEASSSYERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFSWAIIPLFDSNIASVGG
SASPSSPLAPSVSASSSQEGITEPLSKITADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSTETENALDSGSLIYDSLDHGDHLNDSTSMKFPT
NGTFSKSKSSEMKELVRNGSVAHENVENTADDFEAFDFRTTTRNEPFLQLFHCLYVYPLT
VSMSRKRNMFIRVELRRDDTDIRKPPLEAMHPREPGVPLQKWSHTQVAVGARVASYHDEI
KVSLPVIWTPSHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRSEISLPIMKEL
VPHYLQESGKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGS
ELLEAINSLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVD
EAERNAFLVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWF
FLELIVKSMALEQARSFYHNLPSGEDVPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLS
LAKHLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDL
FVEMPGRDPSDRNYLSSILIQEIFLTWDHDDLSMRAKAARILVVLMCKHEFDIRYQKLED
KLYIAQLYFPLVGQILDEMPVFYNLSTIEKREVLIIFLQIVRNLDDETLVKAWEQSIART
RLFFKLLEECLMHFEHRKPADGMLVGSSSRSVIGEGPASPKYSDRLSPAINQYMSEAARQ
EVRGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASALALRESLHPILRQKLE
LWEENLSAAVSLQVLEVSEKFSRTAATKRIATDYGKLDCITSIFMNVFSRNQPLSFWKAL
FPVFNSVFELHGATLMARENDRFLKQIAFHLLRLAVFRNDNVRRRAVIGLQILIRSSFSY
FMQTGRLRVMLTITLSELMSEVQVTQMKPDGTLEESGEARRLRNSLEEMADEAKSSSLLL
ESGLPQNALAAVPEGSEENLWSWSEVKFLSESLLMALDASLEHALLGSVMNVDRYAAAES
FYKLAMAFAPVPDLHIMWLLHLCEAHQEMQSWAEAAQCAVAVAGVVMQALVCRNDGVWSK
DHVSALRKICPMVSSDITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFHQAELFHFCA
SILELVIPVNKSRKAYGQLAKCHTTLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGK
LDRKEYVYREPRDVRLGDIMEKLSRIYESIMDGTTLHVIPDSRQVKADELQPGVCYLQIT
AVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKCESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcgatttcggagaataccacaccattccttcgctggt
tccttgaatttagatccgctgcttgatgaaaatttggagcagtggccacatttaaatgaa
cttgtgcaatgctacagaactgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagcccgacttcatttcagagtcaaatatatgagggtcctgatactgatattgaa
acagagatgcatcttgcaaatgctagacggcctaaaattgaggattcagttgatggtgaa
attcccagcacttctggggcacaactctctgaagataatttctctgacctctcaaatgcc
aaagtctccaagcattttggtgaatcccctctaccgacttatgaaccagtttttgactgg
gaaaatgaaagatcattaatatttgggcaaaggattcctgaagctcatatgtcccagtat
acgagcggtctgaagattgctgtgaaagtcctatcattgtcatttcaagctggactagtt
gagccgtttcatggcacaatttgtttatataatagggagcgaagagaaaaactttctgag
gattttattttccatgtattgcctaccgaaatgcaagaagcaagcagttcctatgaaagg
cgttgcatttttcatctagatgctccatcagcatctatttgtctgctaatacaactagaa
aaacctgccactgaagaaggtggagtgtctccttctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaaactacaagtatggtcgcggatcatgccatacagg
gagtccttttcctgggccatcattccactctttgatagtaacatagcttctgtgggtggc
tctgcttctcccagcagtcctcttgctcccagcgtctctgcgtcaagttcacaagagggc
atcactgagccactttcaaaaattactgcagatggaaagcttggttattcaaatgggaac
tccattgtcgttgaagtgtctaacttaaacaaagtcaaagaaggatacactgaggaatct
ctccaggatccaaagagaaaggttcataaaccagtaaaaggtgtcttgaaattggaaatt
gaaaaactgccagctagttctactgaaactgaaaatgctttggacagtggtagtttgatc
tatgattctcttgatcatggcgaccatttgaatgattcaacttctatgaaattccctact
aatggtaccttttccaagtctaaatcctctgaaatgaaagagcttgttcggaatggttca
gttgctcatgaaaatgtggaaaatactgctgatgattttgaagcttttgacttccgcaca
acgacaaggaatgaaccgttcttgcagctctttcattgcttatatgtctaccctttgact
gttagtatgagtcggaaacgaaacatgtttattcgagttgaactgagaagggacgacaca
gatattcgaaaaccacctctagaggctatgcatccaagggaaccaggtgtaccacttcag
aaatggtctcacacacaagttgctgtgggggcaagggttgccagctaccatgatgaaatc
aaagtttctttgcctgttatttggacaccatcacatcaccttttgtttacattctatcat
gttgatcttcagacaaaacttgaagcaccaaagccggtggtaattggatacgcttcactt
ccattatcgacacatgcacagttcagatctgagatatccttgccaatcatgaaagaattg
gttcctcattatcttcaagaaagtggcaaggagaggctggattacttggaagatggaaag
aatatcttcaagcttcgtttacgactatgttcatcattatacccagttagtgagcgcatt
agggattttttcctagagtatgacaggcatactctacggacaagtcccccttggggatct
gaacttcttgaggcaatcaatagcttgaagaatgttgattccactgctttgcttcaattt
ctttatccaatcttaaacatgcttctccatcttattggcaatggcggagaaactcttcag
gttgctgcctttagagctatggttaacattttaacaagggtgcagcaagagtcagttgat
gaagctgagagaaatgctttcctggtaaactttgttgattacgcttttgatgattttggg
ggccgccagccaccagtgtatcctggtttgtccacagtgtggggaagtttggctcgcagt
aaggcaaaagggtaccgtgttgggcctgtctacgatgatgtcttggcaatggcttggttt
tttcttgagttaattgtcaagtcaatggcactggagcaggctcgatccttctatcacaat
cttccatcaggtgaagatgtcccgccaatgcaattgaaagaaggtgttttcagatgtgtt
gttcagttgtatgattgccttttaacagaagttcatgaacgctgcaagaaaggtctaagc
ttggccaagcatttaaatagtagtttggctttcttttgttatgatcttttatccatcatt
gagcctcgtcaggtttttgaactggtgtccttgtatctcgataagttctctggagtgtgt
caaacggtgctgcatgactgcaagcttacctttttacaaattatatgcgatcatgatctt
tttgttgaaatgcctggacgagatccttctgataggaactatctttcatctatcttaatt
caagagattttccttacatgggatcatgatgacttgtcaatgagggcaaaagctgcaaga
atcttggtggtcctcatgtgtaagcacgagtttgatattcgctaccaaaagctagaggat
aaattatatattgctcaattatattttccccttgttggccagatcctggatgagatgcct
gtcttttacaatctgagtacaattgaaaagcgtgaagtcttgattatatttctgcaaata
gtgcgcaacttggacgatgaaacacttgttaaagcttgggagcagagcattgcccgtacc
agattattctttaaacttttagaagagtgcttgatgcattttgagcataggaaacctgct
gatggcatgcttgttggtagtagttctcgtagtgtgattggggaaggacctgcatcccca
aaatattctgacagactttcacctgcaattaaccagtatatgtctgaggcagcaaggcaa
gaagtcagaggaactccggataatggttatttgtggcagcgggttaactcccaattaagc
tcgcctagtcagccatattctttgagagaagccctagctcaagcccagtcctccagaatt
ggagcttcagcactagcattaagggaatccttgcatccaatcttaaggcaaaagctggaa
ctttgggaagagaacctgagtgctgccgttagtcttcaagttttagaagtttctgagaag
ttctcacggactgccgcaacgaagcgtattgctactgattatggaaaacttgactgtatc
acatccatatttatgaatgtgttctcacgaaatcaaccactctctttctggaaagcacta
tttcctgtcttcaacagtgttttcgaacttcatggagctacattgatggcaagagaaaat
gatcgtttcttaaagcaaattgctttccaccttcttcggcttgcagtgtttcgaaatgac
aatgtcagaagaagggctgtaattggcttgcagatacttattcggagctcgttctcttat
tttatgcagacgggaagattaagagtcatgctaaccattactttgtcagagttaatgtct
gaagttcaagtaacacaaatgaaacctgatggaacgctagaagaaagtggtgaagctcgt
cgtcttcgaaattctttggaggaaatggcagatgaggctaagagttcctccttattactt
gagtctgggctcccacaaaatgcactggctgctgttccagaaggatcagaagaaaacctc
tggtcctggtctgaggtgaaatttctttctgagagtcttctgatggctcttgatgccagc
ctggaacatgcacttctgggttctgttatgaatgtcgacagatatgcagctgcagagagc
ttttataaactagcgatggcatttgctcctgtaccagatcttcacataatgtggttactg
catctttgtgaagctcatcaggaaatgcagtcttgggctgaagctgctcaatgcgctgtt
gctgttgctggtgtagtgatgcaggcccttgtgtgtaggaatgatggtgtctggagcaag
gatcacgtgagtgcattacgcaaaatatgccccatggtcagcagtgacatcacttctgag
gcttcagcagctgaggtggagggatatggtgcttcaaaactcacagttgactcggctgtg
aagtatttacagcttgcaaataagcttttccatcaggctgagttgttccatttctgtgca
agcattctagaacttgtaatcccagtaaataaaagcaggaaggcatatggacagcttgca
aaatgccacacaacacttactaatatctacgagtctatccttgagcaggagtctagccct
attcctttcacggacgccacatattatagagttggattttatggtgagaagtttgggaag
ctggacaggaaagaatatgtttatagagagcctcgggatgtgcgattaggcgacattatg
gagaaattgagccgtatctacgagtcgataatggatggaactacattacacgtaattcct
gattcaaggcaagtcaaagcagatgagttgcagcctggagtctgctacctgcaaataact
gcagttgatcctgtaatggaggatgaagatttaggaagtagaagggaaaggatattctct
ctctctacaggaagtgtccgtgctcgagtctttgaccggtttttgtttgatacccctttc
actaaaaatggaaagacacaaggaggcttggaagaccaatggaaacggcgaacagttctg
caaactgagggatcttttcctgcgctagtgaatagactcttggttatcaaatgtgaatcc
cttgagttctccccagtcgagaacgcaattggaatgattgaaactaggacagctgcatta
aggaatgaacttgaagagcctagaagctcagaaggcgatcaacttccccgtttgcagagc
ttacagaggattcttcaaggttcagtagcagttcaagttaacagtggagtcctcagcgtc
tgtacagctttcctttctggtgagcctgcaactaggttgcgttcgcaagagctacaacaa
ctcattgctgcccttcttgaatttatggctgtgtgcaaacgtgctattcgagtacacttt
aggttgatcggggaagaagatcaggattttcatactcagcttgtaaacgggttccagtct
ctcactgcagaactatcacattatattcctgcaattctttcggagctttag
DBGET
integrated database retrieval system
