Solanum lycopersicum (tomato): 101262840
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Entry
101262840 CDS
T02665
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X2
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101262840
Enzymes [BR:
sly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
101262840
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101262840
Prokaryotic type
101262840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
Motif
Other DBs
NCBI-GeneID:
101262840
NCBI-ProteinID:
XP_004245703
UniProt:
A0A3Q7HSU1
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Position
8:complement(65194764..65198244)
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AA seq
488 aa
AA seq
DB search
MASAIPVVQSGRIRVVKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDQANKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLEKLQGNLESTLRIPFFLFQGEAIDTIPNFLKECGASLL
VTDFSPLRDVRSWKEKICERVDESVTVHEVDAHNIVPLWVASNKLEYSARTIRGKINKLL
PEYLIELPAIEPLKIKWSSSNAPIDWPKLVSDVVRKGAEVPELEWCEPGEDAAFEVLMGS
KKGFLTTRLKTYSTDRNNPLKPQALSGLSPYLHFGQISAQRCALEANKVRKNYTQAVDTF
LEEMIVRRELSDNFCYYQPQYDSLLGAWEWARKTLMEHASDKREHIYTREQLEKAQTADV
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTNGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGVHDQGWRERPVFGKIRYMNYAGCKKKFNVDGYISYVKRLVGESKKRKAEVILD
KKAKELRN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaattccagttgttcagtcgggtcggatccgggttgtgaagcaaggatca
ggaccgttggttggaccggtggtgtattggatgtttagagatcaacggataagagataac
tgggcgttgatccacgccgttgatcaagctaacaaggcaaatgtacctgtagctattgct
ttcaatttgttcgatcagtttttaggtgctaaagctagacagttagggtttatgcttaga
ggccttgagaagcttcaggggaacctcgaaagtactcttcgaattccgtttttcctattt
cagggagaagcaatagacacaattcccaactttcttaaagaatgtggagcttctcttcta
gtaacggatttctcaccgttgagggatgttaggagttggaaagaaaaaatttgtgagagg
gttgatgaatcagtgacagtacatgaggttgatgcacacaacattgttcctctttgggtg
gcatcaaataaattggaatacagtgctagaacgatacgtggtaaaataaataagctgctt
cctgagtatctgattgaattgcctgcaatagagcctcttaagataaagtggtcttcttca
aacgctccaatagattggccaaaactagtttcagatgttgtaaggaaaggagcagaagta
cctgaacttgaatggtgtgaaccaggtgaagacgctgcattcgaagtgttaatgggaagt
aaaaaagggttcctgactaccaggttgaagacttattcaacggaccggaacaaccctctg
aaaccccaagcactttctggtctctctccttatttgcactttgggcagatatctgcacag
agatgtgcattagaagcaaacaaagttcggaaaaactatactcaggcagttgacacattt
ctggaggaaatgattgtgcgcagagagctttctgataacttctgctattatcagcctcaa
tatgattcattactgggtgcatgggaatgggcgcgtaaaaccttaatggaacatgcatct
gataaacgagaacatatatacacccgagagcaattggagaaggcacagactgcagatgtt
ctttggaatgcttcccaattagagatggttcattatggaaaaatgcatggttttatgagg
atgtattgggctaaaaagatactcgagtggacaaatggaccagaagaagctctggccatc
acaatatatttaaatgataagtatcatatagatggaagagaccctagtggttatgttgga
tgcatgtggtcaatatgtggcgtacacgaccagggttggcgagaacgcccggtatttggg
aaaatcagatacatgaactatgcaggttgcaagaagaagttcaatgtagacggatatatt
tcatacgttaagaggctagttggtgaaagcaagaaaagaaaagcagaagtaattttggac
aaaaaggcaaaagaattgcgtaattag
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