Solanum lycopersicum (tomato): 101262869
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Entry
101262869 CDS
T02665
Name
(RefSeq) chloride channel protein CLC-c-like isoform X2
KO
K05016
chloride channel 7
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101262869
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101262869
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101262869
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101262869
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101262869
Ion channels [BR:
sly04040
]
Chloride channels
Chloride channel (CLC)
101262869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
101262869
NCBI-ProteinID:
XP_004248849
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All DBs
Position
10:24947174..24951767
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AA seq
778 aa
AA seq
DB search
MMENQVDIENDGGGMIEEEKFDLERNFSTISETGSIREPLLKSKSRVNNTSQIAIVGANV
YPIESLDYDIVENDLFKQDWRSRKKVEIFQYIFLKWTLVLLIGLSTGLVGFFNNIGVENI
AGFKLLLTSNLMLEGKYFQAFAAFAGCNVFFATCAAALCAFIAPAAAGSGIPEVKAYLNG
IDAHSILAPSTLLVKIFGSILGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKW
LKYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEIASWWRSALLWRTFFTTAVVA
MVLRSLIQFCRGGNCGLFGQGGLIMFDVNSGVSNYNTVDVLALILIGVLGGLLGSLYNYL
VDKVLRTYAVINERGPAFKILLVMSVSILTSCCSYGLPWFAGCIPCPVGLEEKCPTIGRS
GNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSNNSNEFHISTLLIFFAGVYCLGIITY
GIAIPSGLFIPVILAGASYGRIFGRALGSLSNLNVGLFSLLGAASFLGGTMRMTVSICVI
LLELTNNLLMLPLVMLVLLISKTVADIFNKGVYDQIVKMKGLPFLEAHAEPFMRNLVAGD
VCSGPLLSFSGVEKVGNIVHALKYSRHNGFPVIDEPPFSETPELCGLVLRSHLLVLLNGK
KFTKQRVLSASNILSRFHAFDFAKPGSGKGLKFEDLVITEEEMEMYIDLHPITNTSPYTV
VETMSLAKAAILFRQLGLRHLCVVPKKTGRAPIVGILTRHDFMHEHISNLYPHLVPHK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaccaagttgacatagagaatgatggaggaggtatgattgaggaagagaaa
tttgatttggagagaaatttttcaacaatttctgaaactggtagcataagagagcctttg
ctcaaatctaagagcagagtcaacaatacctcccaaatcgctattgttggagccaatgtt
tatcccattgaaagcctcgactatgatattgtagaaaatgaccttttcaagcaagactgg
agatctaggaaaaaggttgagatatttcaatatatatttcttaaatggactcttgtgctc
ttaattggattgagtactggacttgttggtttctttaacaacattggagtggaaaatatt
gctggtttcaagcttcttctcactagcaacttaatgcttgagggaaagtatttccaggca
tttgctgcttttgctggttgcaatgtgttttttgcaacttgtgccgcagccctctgtgca
tttattgcacctgcagctgcaggctctggtatacctgaagtaaaagcctatctgaatggt
atcgatgctcattccattttggctccaagtacattacttgtcaagatctttggatccatt
ttgggcgtttctgctggatttgttgttggcaaggaaggacccatggtccatactggtgct
tgcatagcaaacttacttggacaagggggttcccgaaaatatcatttaacttggaaatgg
ctaaaatacttcaaaaacgaccgtgatcgtagggatttaatcacttgtggtgccgctgct
ggtgttgcagctgctttccgtgccccagttggaggagttctttttgctcttgaggaaata
gcatcatggtggcgaagtgctttactttggaggactttcttcacaactgccgtcgttgct
atggttctcagatctctcatacaattctgtcgcggtggaaactgtggattatttgggcaa
ggaggtttgataatgtttgatgtcaattcaggagtatctaattacaacacagtagacgta
ttggcacttatcttaattggagtacttggaggtcttctgggaagcctttataactatctt
gtcgacaaggtccttcggacttacgctgtcattaatgagagaggtcctgctttcaagatc
ttgcttgtcatgagtgtttctatcctgacttcttgttgctcttatggcctaccatggttt
gcagggtgcattccatgtcctgtaggcttggaggaaaagtgcccaactataggtcgctct
ggaaactacaaaaatttccagtgtccagcagggcattacaatgatcttgcatcactcttt
ctgaacaccaatgatgatgccatccgcaatttgtttagttcaaataattcaaatgaattt
cacatctctacacttctaatcttctttgctggggtatattgccttggcattattacctat
ggaattgctattccttctggactcttcattcctgtcatacttgctggagcatcctatggg
cgtatttttggtagagccttgggttcgttatccaatcttaatgttggtcttttttcgcta
cttggtgctgcctctttccttggtggtaccatgagaatgacagtatcaatatgtgtcata
ctccttgagcttacaaacaatctactaatgcttccattggtgatgcttgttctcctcata
tcaaaaaccgtggctgatatttttaataagggtgtctatgaccagattgtgaaaatgaaa
ggtttgcctttcttggaagcacatgctgaaccatttatgaggaatctggttgctggagat
gtctgttctgggccattattgtcattttcaggtgtggagaaggtggggaacatagtacat
gctttgaagtatagtaggcataatggctttcctgtgattgatgagccacctttctctgag
acaccagagttatgtgggcttgttctacggtcacatttacttgttttgctcaatggaaag
aaattcacaaaacaacgtgtattgagtgcctccaatattttgagtaggtttcatgcattt
gattttgctaagccaggatcaggcaaggggcttaagtttgaggatctcgtcatcacggaa
gaggagatggaaatgtatattgatctccatcctataacaaatacatccccatacacagta
gtggagaccatgtctcttgcgaaagctgcaatccttttccgacaacttggtcttagacac
ttgtgtgttgtcccaaagaaaactgggagagctccaatcgtcggaatcttaacaaggcat
gacttcatgcatgagcatatatctaatctctacccgcatcttgtcccccacaagtag
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