Solanum lycopersicum (tomato): 101262955
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Entry
101262955 CDS
T02665
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00061
Fatty acid biosynthesis
sly00071
Fatty acid degradation
sly01100
Metabolic pathways
sly01212
Fatty acid metabolism
sly04146
Peroxisome
Module
sly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101262955
00071 Fatty acid degradation
101262955
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101262955
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sly01004
]
101262955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101262955
Enzymes [BR:
sly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101262955
Lipid biosynthesis proteins [BR:
sly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101262955
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of breast milk
101262955
Exosomal proteins of breast cancer cells
101262955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Haem_oxygenas_2
Motif
Other DBs
NCBI-GeneID:
101262955
NCBI-ProteinID:
XP_004229375
UniProt:
A0A3Q7F0U3
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Position
1:74467992..74474117
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AA seq
663 aa
AA seq
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MSMNKFGLKVEEGKEGKNGEPSIGPVYRNPIAKNGFPSADPDLSTAWQLFRSAVEKYPGN
RMLGWRDFKDGKWGPYNWKTYKEAYEETLQTGSALRAHGIEPGARIGIYGANCPQWIVAM
EACSAHSLICVPLYDTLGSGAVDFIIEHAEIDIVFVQDKKVKELLNAECTHAKRLKLIVC
FTLLQQEEKDKAVSMNIKPYSWNEFLNMGKENPSEPSPPQPLDICTIMYTSGTSGEPKGV
ILTHENMTASVTGVDHFMEEFEDKMTVDDVYISFLPLAHILDRMIEEFFFHRGASVGYFH
GNINEIQEDMMELKPTFLAGVPRVYEKVHEGVLKALEELNPFRRHMFHVLYNFKLKWMNL
GYKQKYASRLADLLAFRKVKNRLGGRIRLIVSGGAPLSTEVEEFLRVTSCGFVLQGYGLT
ETCGLATIGHPDEMCMLGTVGPPFVFTEVRLEEVPEMGYDPLADPSRGEICVRGRTTFTG
YYKNPELTREAIKDGWFHTGDIGEMMPNGVVKVIDRKKNVIKLSQGEYVALEYLEKVYAI
APIVEDIWVYGDSFKSMLIAVVAPHEGNTKKWADKNGHKGSITELCSLQDLNQYVLLELK
SAAERNKLRGFENIKGVILEPQPFEFDKELVTATMKKRRERLLKRYKLEIDDLYKRLNAA
AKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaacaaatttggtttgaaggttgaggaaggaaaagaaggaaaaaatggagag
ccatctattggtcctgtttatagaaatccaatagctaaaaatggttttccatcagctgat
cctgatttgtctacagcttggcaactctttagatcagctgttgaaaaatatccaggaaac
agaatgctgggatggcgtgattttaaggatggaaagtggggtccttataattggaaaacc
tacaaagaagcttatgaagagactttgcagactggttctgcattacgggctcacggaatt
gaacctggtgctcgaattggaatttatggagccaattgtcctcagtggatagtagcaatg
gaggcttgcagtgctcacagtttgatatgtgttcctctctatgataccctcggatccggc
gctgtagattttattattgaacatgctgagattgatatcgtttttgttcaagataagaaa
gtgaaagaacttctaaatgcagagtgcacacatgctaaacgcctgaaattgatcgtgtgt
ttcactttgctacagcaggaagaaaaggataaggcagtttcaatgaatatcaagccatac
tcttggaatgaatttctcaacatgggtaaagagaatccatcagagccttcaccaccacag
ccattagacatatgtacaatcatgtatactagtggaactagcggcgaacctaaaggtgta
atattgactcatgaaaatatgacagcatctgtaacaggagttgatcattttatggaagaa
ttcgaagacaagatgacagtggatgatgtgtacatatctttcctaccacttgctcatata
cttgatcggatgattgaagaattcttctttcataggggtgcttctgttggctacttccat
gggaatattaatgagatacaagaagacatgatggagttgaagccaacctttttagctgga
gtacctcgagtttatgaaaaagtgcatgaaggtgtactaaaagcacttgaagaactcaat
cctttcaggaggcacatgttccatgtgctatataacttcaagcttaaatggatgaatctt
gggtacaaacagaagtatgcttcgcgactggctgatctactagcttttagaaaggttaag
aataggctaggtggcaggattcgtctcatagtttccggtggtgctcctttaagcactgag
gtggaagagttcttgcgggttacctcttgtggatttgtcctacaaggctatggtttgaca
gagacttgtggtttggccaccattgggcatccagatgaaatgtgcatgcttggaactgtt
ggtccaccatttgtcttcacagaagttcgtctcgaggaagttcctgaaatgggatatgat
ccgctagcagacccttcccggggagagatatgcgtgagagggaggaccactttcactgga
tactacaaaaatccagagttgacaagagaagctatcaaagatggatggtttcatacaggt
gacatcggagaaatgatgcctaatggagttgtaaaagtcattgatagaaagaaaaatgtt
ataaagctatcacaaggagaatatgttgcattggaatatctggaaaaggtttatgctatt
gcgcccatcgttgaagatatatgggtatatggggacagcttcaagtccatgttgatagca
gtcgtggcgccacatgaagggaatacgaagaaatgggctgataaaaatggccacaaaggt
tcaattactgaactttgttccctacaagacctaaaccaatatgttctccttgagctgaaa
tctgctgcagaaaggaacaagctaagaggtttcgagaacatcaaaggagtgattctggaa
cctcaaccttttgagtttgacaaggagttggtaactgcaacaatgaaaaagagaagggag
agactgcttaagcgttacaagttggagattgatgacctttacaaaaggcttaatgcagca
gctaaacgctga
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