Solanum lycopersicum (tomato): 101263053
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Entry
101263053 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101263053
03015 mRNA surveillance pathway
101263053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101263053
03041 Spliceosome [BR:
sly03041
]
101263053
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101263053
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101263053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101263053
NCBI-ProteinID:
XP_004246955
UniProt:
A0A3Q7HZW4
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All DBs
Position
9:complement(30823788..30831907)
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AA seq
921 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVIKPWIAKRVTELI
GFEDEVLINFIYSLLERKVANGKELQISLTGFMERNTAKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRNNKAEMDRIANEIQKKKERDNRELNQEKRKKMDDYGSDLRQKNTSREPT
PKQQLQVRLMDNLDPVERNGSSVRNRVSKSPRSADHSLSPRKSRPISKSFSNSRSYSGER
HRSRSTSGSPEERRRRSLSSERAYRSAPKCSVSPRRKHSPRQSHSPPRHRRRSTSRVRRR
SPSPARYRRHSPFQRRSRSPLRRRSRSPLRRRSRSPLQRRSRSPLRRRSRSPLRRRSRSP
IRRRSRSSHRHRSRSPIWRRSRSPIWCRSRSPSRHSPVRYRSRSPFKCQSPLRRRTPSPT
QRRSPSPVSRGYHRSPLSPRQRSPFLAQRKTSIFGRKRSLTPARRSLSSQESLSPSPIYR
RSPSPIRKRISKNERSPFQSPRGRIRSREKYSSIRYASPVKTEAHKGSRSLERRRSSSGS
PQKRIYDRKDSREKDLPLPPQLSRSPSVPESPHRSRSDSESPPTKRGRSPSEDRGPRSTS
NPREIKTIDFDSLSPSKLREQKVSSDISEKIADQKEMNHSREAFEHKPRSSRKIPTTPNP
YKDLGKRFVQKEFSDIHSHSDQLESRKRNEAIKSEKFSGTMQHSKELDKQKSPSTHRHSH
SVKRLKESYDGESVKADKENLSHTNDTKGKELYVESEAPLTSSKKVEQNDLSSKEGSGFE
ESEKRRAKIKDKRKHKRSDRYESTSDDSFDSDVEDRKEAKKRRKEERRLKKEEKRRRREE
RRHRKEERRSQKRKSKSVNAISSPSDTERNPNNRASDDEHLREEYQHGCKIEESESLQKR
LEIELREKALESLRAKKGVSH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggtttttttaggggcacttctgctgagcaggacactcgattctctaataag
caagctaagttgttaaaatctcagaagttcgctcctgaattggaacatctggtcgatatg
acaaaggtcaagatggatgtaattaaaccatggattgctaagcgagttactgagcttatt
ggtttcgaagatgaagtgcttatcaattttatttatagccttcttgaacgaaaggtagct
aatggcaaggagcttcaaatttcacttactggtttcatggaaagaaacaccgcaaaattc
atgaaagagctttgggcattactacttagtgcacagaacaatgccagtggtgttcctcaa
cagttcctagaagccaaagaagaggaaatgagaaacaataaggctgagatggatcgaatt
gcaaacgagattcagaagaaaaaggagagagacaacagggagctgaatcaagagaaaagg
aagaagatggatgattatggcagcgatttaagacagaaaaatacttcacgggaaccaact
ccaaaacaacagcttcaggtgcgcttgatggataatttagatcctgttgagagaaacgga
tcaagcgtaagaaacagggtctctaaatccccacggtcagcagatcattcactctccccc
aggaaatcaaggccaatcagcaagtcattctccaattcgaggagttactctggtgaaagg
cataggtcacgaagtacatccggatctccagaagaaaggagacgtcgctccctttcatct
gaaagggcatatcgctctgcaccaaagtgttctgtttcacctcgtaggaaacattcacct
cgacaatcccattctccaccaaggcataggcgaagatcaacctctcgagtacgtcgaagg
tcaccttctcctgcaagataccgaagacattctccattccaacgtagatcaaggtctccg
cttcgacgcagatcaaggtctccgcttcgacgcagatcaaggtccccgcttcaacgcaga
tcaaggtctccgcttcgacgcagatcaaggtctccgcttcgacgcagatcaaggtccccg
attcgacgtagatcaaggtcttcacatcgacataggtcgaggtctcccatttggcgtaga
tcacgatcccctatatggtgtaggtcaaggtctccaagtagacactcaccagtgcgatac
agatcaaggtcaccttttaaatgtcaatcaccacttcgacgcagaacaccatctccaacg
caacgtaggtccccttctccagtgagtcgggggtaccaccgatctccattgagtcctcgg
caaaggtctccattcctagctcaacgaaaaacctccatttttggtaggaagagatcctta
actcctgccagaaggtctctttcatctcaagaatcactttccccatcacccatttaccgc
aggtctccttcaccaatcagaaagagaatatcgaagaatgaaaggtcaccatttcaatct
cctcgaggaaggataaggagccgtgagaaatactcctctattcgatatgcttcaccagta
aaaactgaggcccataaaggatccagatccttggaacgcagacgttcttcttctgggtca
ccgcagaaaaggatatatgaccgtaaggattcacgagaaaaagatctgcctttgccgcct
caactaagccggtcaccatctgttccagaatctccacatcgctctagatctgactcagaa
tctccaccaaccaaaaggggaaggagtcctagtgaagatagagggccaaggagtacttcg
aacccgagggagataaagacaattgacttcgacagccttagtccaagtaaattgagagag
cagaaagttagttctgacatttctgagaaaatcgcagatcagaaagaaatgaatcattca
agggaggcttttgagcataaacctaggtcttcaagaaaaattcccacaacacccaatcca
tataaagatcttgggaagaggtttgtccagaaagaattttctgacattcatagccattca
gatcaattggagtcgagaaagcgaaatgaagcgattaagagtgaaaaattttcaggaact
atgcagcattcaaaggaactggataaacaaaagtcaccatcaactcatagacactctcat
tcagttaaaaggttaaaggaatcatatgatggggagagtgtcaaagcagataaggaaaac
ctatctcacacaaacgataccaagggcaaagagctatatgttgagtccgaagctcctctc
acttcatcaaagaaagttgagcagaatgatttaagtagtaaagagggttctggtttcgag
gaaagtgaaaagcgtagagctaaaattaaggataaaagaaagcataagaggtctgacaga
tatgagtcaacgtcagatgatagttttgattctgatgttgaggataggaaggaggctaaa
aagagaaggaaagaggagagaagattgaagaaagaggagaagcgtcgtcggcgggaagag
aggcggcacagaaaggaagaaagacgttctcagaaacgaaaatcgaagtcagttaatgcc
atatcctcgccttcagatacagagaggaatcctaataatcgtgcttcagatgatgaacat
ctgagagaagagtatcaacatggatgtaagattgaggagtcagagtccttgcagaaaaga
cttgaaattgagctgcgggagaaggctctcgagtctcttagagcaaaaaagggtgtcagt
cattaa
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