Solanum lycopersicum (tomato): 101263057
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Entry
101263057 CDS
T02665
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101263057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101263057
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101263057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_occluded
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101263057
NCBI-ProteinID:
XP_004229850
UniProt:
A0A3Q7ELF6
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All DBs
Position
1:complement(81119788..81124663)
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AA seq
250 aa
AA seq
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MRAIFCGNLEFDARQSDVERLFRRYGKVDRVDMKSGFAFIYMEDERDADDAIRRLDRIEF
GKKGRRLRVEWTKDRGSRRPEISRKPAANTRPSKTLFVINFDPVHTQTRDIEKYFEPYGR
ISNVRIRKNFAFVQYESVDDASRALEATNMSKFMDRVISVEFAIRDDDDRRNGRSPDRRG
RDMSPDRRGYDRRRSPSPYRRDRGSPDYGRGAPLNSRPQTRRSPEYGRAESPVNERYHSR
SPPPRERSRS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatattttgtggcaatctggagtttgacgctcgccagtcagatgtggagcgg
cttttcagaagatatgggaaggttgatagggtggatatgaaatctggatttgctttcatt
tatatggaggacgagcgagatgctgatgatgcaattagaaggcttgacaggatagagttt
ggtaaaaagggacgcaggcttcgtgtagaatggactaaggatcgtggtagtaggaggcct
gaaatttccagaaaacctgctgcgaatactagaccttcaaagactttatttgtcatcaat
tttgatccagttcatactcagacaagggacatagagaagtattttgaaccatatggtaga
atatcaaatgttcgaattagaaagaatttcgcgtttgttcagtatgagtcagtggatgat
gctagcagagcattagaagcaacaaacatgagcaagttcatggatcgagttatttctgtg
gaatttgcaattcgagacgatgatgacaggagaaatggtcgcagtcctgacaggagaggc
cgtgacatgtcgcctgacagaagaggttatgatcgtcggcgttcccctagcccatataga
agggataggggtagtcctgactatggacgtggagcacctctaaactcaaggcctcagacc
aggagaagtcctgagtatggtcgagcagaaagtcccgtcaatgagagatatcacagtcgt
tcaccacctccgcgtgagaggtctcgatcttga
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