Solanum lycopersicum (tomato): 101263107
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Entry
101263107 CDS
T02665
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
101263107
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101263107
04121 Ubiquitin system [BR:
sly04121
]
101263107
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101263107
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101263107
Membrane trafficking [BR:
sly04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
101263107
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101263107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101263107
NCBI-ProteinID:
XP_004237481
UniProt:
A0A3Q7G4V4
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All DBs
Position
4:51525525..51537750
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AA seq
566 aa
AA seq
DB search
MNIHSSSLIHKFKHGFNSHWFTVQVSVAATVLSIAGGLIFAIKDGAKITNIMLSSSKKDH
FTVPGLQNLGNNCFLNVVLQALASCKSFGKFLEQVVDEYEGSSMEGSRDLPVVAALASLV
EELCTVRHGRTVLSPRRLMHAMTSHIPGFNLTSQQDAEEALSHLLSSLRAELSESFVHDH
SSLADVITLPNSRIVTQRMKGESEQERWRQSFLGPFDGILGSFLNCQTCSFQISLDFQLF
HSLHLVPTSSSTGAIMPGCSVEHCLKQFFVAEQLENYKCSHCWHTAAEKYVSAMDENEAI
VEKLKLCNEEDSCDCKQLACLAKFPWSNSFSRTFKQLSIGRSPKVLCLHLQRASINVFGE
QNKLQGHISFPLILDLAPFVKSGVGTKSWEENLQIGQITHQQPFPLFNNLNLQANKEMLT
FITQSERKFSTEVEDTAGLRDSDNFGIKALKSKSSLLEAGDDKKISLNQLAPHSGNQGET
SRITHSISHKYQLTSVVQHFGIVGSGHYTVFRRVRDKISEDNHAELLGSAVDKWFCISDT
EVYGVSERDVLDAEATLLFYEKVSDC
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacactcgtcttcacttatacacaaattcaaacatgggtttaattcccattgg
tttactgttcaagtttcagttgctgctactgtattaagtattgctggtggtttgattttt
gctataaaagatggtgcaaaaatcacaaacatcatgctatcaagttcaaaaaaagatcat
ttcacagtacctggattgcaaaatcttggtaacaactgctttttgaatgttgttttacag
gctttagctagctgtaaaagctttggcaaatttctggagcaagttgtggatgaatatgag
ggttcatcaatggaaggaagtagagacttgcccgttgttgctgctttggcttcgcttgtt
gaagaattatgtactgtgcgacatggaagaactgttctaagtccaaggagattgatgcat
gccatgacttctcacattcctggtttcaatctaactagccagcaggatgcagaggaagca
ctctcccatcttttatcttctttaagagccgaactgtcagaatcttttgttcatgatcac
agctctttggcggatgtaattacacttcctaattctaggattgttacacaaaggatgaaa
ggagaaagtgaacaggagagatggaggcagagttttcttgggccttttgatgggattctt
ggtagttttttaaactgccaaacttgttcgtttcagatctctctggattttcagttgttt
catagtttgcatcttgtgccaacatcaagcagcactggggctattatgcctgggtgttct
gtcgagcattgcctgaagcagttctttgttgcggaacaactcgagaactataagtgcagc
cactgttggcatactgctgccgaaaagtatgtctctgccatggatgaaaatgaggctatt
gttgaaaaacttaagctgtgcaatgaggaagattcatgtgattgcaaacagctagcatgc
cttgctaaatttccatggtcaaatagcttctcacgcactttcaagcaactcagtattggc
cggagtcctaaggttctctgtcttcatttacaacgtgcttctataaatgtatttggagaa
cagaacaaacttcagggccatatttcatttccattgattttggacttggctcctttcgtg
aagagtggagtgggaacaaagagttgggaagagaatctgcaaattgggcaaatcacacat
cagcaacctttccctttgttcaataacttaaatctgcaagctaataaggagatgttgact
ttcatcacccaaagtgaaagaaaattttctacagaggtagaagatacggccggtttgcgt
gactcagataattttggtattaaagcactaaagtcaaaatcaagtttgcttgaggctgga
gacgacaagaagatcagcttaaatcagctggctccacattctggaaatcagggtgaaact
tcccgaataacgcattccataagtcacaagtaccaactaacctctgtggttcagcacttt
ggaatagttggtagtgggcattacaccgttttcagacgagtgagagacaaaattagtgaa
gacaatcatgctgaactactgggatctgctgttgataagtggttttgcatctcagacacc
gaagtatatggggtctccgagagagatgttcttgatgctgaagcaaccttacttttctat
gaaaaagtttctgattgctaa
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