Solanum lycopersicum (tomato): 101263189
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Entry
101263189 CDS
T02665
Name
(RefSeq) la-related protein 6B
KO
K15191
La-related protein 7
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101263189
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
101263189
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Paralog
GFIT
Motif
Pfam:
La
RRM_1
HENMT1_C
PAM2
Hen1_LCD
Motif
Other DBs
NCBI-GeneID:
101263189
NCBI-ProteinID:
XP_004251985
UniProt:
A0A3Q7J5F8
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Position
12:complement(9525329..9537701)
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AA seq
473 aa
AA seq
DB search
MAMEEEYSVSVDSHTSSSASLTYNIDSSSSNTSKLNAQAPAFLPRTSSGRVYATRAAPLH
QITTHIAIQNQFLYAPQLSLQSPQSPYYGGGGVARRFVDQEVAAATTADADISAKNGGLT
EEAAQKIVNQVEFYFSDLNLATTENLIRHMIKDPEGYVPISVVASFKKIKALIGSHAQLA
EVLRCSINLVVSEDGKKVKRKNPLTEAALEELQSRIVVAENLPEDHCHQNLMKIFSAVGR
VKMIRTCHPQPSNGGASSASRSAKSDSTMYSNKLHAFVEYDAVELAEKAVLELNDVDNWR
NGLKVHLLLRRAAKSGQARVKKVGHESDPNSKEDDDVALELNEKHDGDSSHHVDVQSNDV
AEEHGRVGKKKGNNRGRGKVQGQGPGQTRGRGRETPQFRQTNRGGRTGGSVTKVNTGSSV
ASAPSSTGGVNVTGQPAVVTDQSGGKQSSVPRMPDGTKGFSMGRGKPVAVRTE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaagaagaatattcagtttctgtagattctcacacttcatcttctgcatct
ctcacttacaatatcgattcctcttcttctaatacaagcaaacttaacgctcaagctcct
gctttccttcctagaacatcttctggacgtgtctatgctacccgtgctgctccgcttcat
cagatcacaactcatattgccatacagaatcagttcctttatgcccctcaattgtcacta
cagtctcctcagtcgccttactatggcggtggtggtgttgctagaagatttgttgatcaa
gaggttgctgccgctactactgctgatgccgatatttcagctaagaatggtgggttaact
gaagaagctgctcagaaaatcgttaatcaggtggagttctatttcagcgatctaaatttg
gcaacgaccgaaaatttgataaggcatatgatcaaggatccagaggggtatgtaccaata
tcagtggttgcatcattcaagaagattaaagctctaataggtagtcatgctcagcttgcc
gaagttctacgctgctcaataaatcttgttgttagtgaagatggaaagaaagttaaacgg
aaaaatcctctgactgaagctgccctagaggagttgcagtctcgcatagtggttgctgag
aatttgcctgaggaccactgccaccagaacctcatgaagattttttcagcagttggaagg
gtaaaaatgatacggacctgccaccctcagccttcaaatggtggggcttcttcagcatct
agatcagcaaaatcagacagcacgatgtacagtaacaagttgcatgcatttgtggagtac
gacgctgtagaattggctgagaaggcggttcttgagctaaatgacgtggataactggcga
aatggtctaaaagtccatctgctgcttagacgcgcagcgaaatctggtcaagcccgagtg
aagaaggttggtcatgaaagtgatccaaactccaaagaagatgatgatgttgcattggaa
ctcaatgagaaacatgatggagactcctctcaccatgttgacgtgcagtccaatgacgtt
gcagaggagcatggccgcgttgggaagaagaaagggaacaatcgtggtcggggtaaggta
cagggacaaggaccaggacagacgaggggtcgaggacgtgaaactccccagtttcgacaa
accaatcgtggagggcgtacagggggttctgtaacaaaagtgaatactggaagtagtgtg
gctagtgccccctcgagtactggtggtgttaatgtaacaggccagcctgcagtagttact
gaccagtcaggtggcaagcaatcttctgtgcctcgcatgccagatggcacgaagggattc
tccatgggtcgagggaaaccagtagctgtaagaactgagtga
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