Solanum lycopersicum (tomato): 101263198
Help
Entry
101263198 CDS
T02665
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
101263198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sly03011
]
101263198
Ribosome [BR:
sly03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
101263198
Bacteria
101263198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP4
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
101263198
NCBI-ProteinID:
XP_004253265
UniProt:
A0A494G8L0
LinkDB
All DBs
Position
4:60793371..60800091
Genome browser
AA seq
513 aa
AA seq
DB search
MPLLLLPCKSFSIFNPILPLNTSVIYNTAIQFSGFSLSPKYPLPRTPKSSKNLSIHWNYQ
INLPTHVLFCSKNEIFEEFRTTQLAELPESEELELHNKPYLKQIDNGVVSDVEEDQKKVS
KDEVLEPFYKLFKPIESNEEESDIEQEEEVHPVVEESKKVSVEYYEPKPGDLVVGVVVSG
NENKLDVSIGADLLGTMLTKDVLPLYDKEIGYLLCDLEKDAEEFLVRGKMGILSYDDAVS
GESTPGKPVVEPGTVLFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQLNEPIEVKIT
EWNIGGLLTRIEGLRAFLPKAELMNRVNSYTELKENVGRRINVLITRINEETNDLILSEK
EAWQMLNLQEGTLVEGTVKRLFPFGAQIRLGETNRSGLLHISNVTQAKVTSMSNLLAVDE
KVKVMVVKSMFPDKISLSIANLESEPGLFLSDKERVFSEAKQMAKKFRQNLPTVSATKKP
EPLPTDRLPFEDEENMYANWKWFKFDRDNVNME
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccacttcttcttcttccatgtaaatctttctctattttcaatccaattttgcccctc
aacacctctgttatttacaacacagctatccaattctcaggtttttccctttctccaaaa
tacccacttcctagaaccccaaaatcttccaagaatttgtcaatccattggaattatcaa
ataaatttgcctacccatgtcttgttttgctctaaaaatgaaatctttgaagaatttagg
actacccagttggctgaattgcctgaaagtgaagagcttgaattgcataataagccatat
ttaaagcaaatagataatggggttgtctcagatgtagaggaggaccagaaaaaagttagt
aaagatgaagttttggagccattttataagttatttaagcctatagagtctaatgaagaa
gaaagtgatatagaacaggaggaagaggttcatccagttgtagaagagagtaagaaggtt
agtgtagagtattacgaaccgaaaccgggtgatttggtggtaggtgttgtggtttcgggg
aatgagaataagcttgatgtgagtattggtgctgacctattgggtacaatgttaactaag
gatgttttgcctttgtatgacaaagagataggctatttgctgtgtgatttagagaaggat
gctgaggaattcttggtgagagggaaaatgggaattctgagctatgatgatgcagtgagt
ggggaatcaacgccggggaagcccgttgtggagcctgggactgttctttttgctgaggtt
cttggaagaactctcagtggtcgaccactgctttcaacaagaaggctctttagacgcatt
gcttggcatcgagtgaggcagattaaacaactaaatgaacctattgaggtgaagataaca
gagtggaatattggtggtcttcttacaagaatagagggcttacgggcttttcttccaaag
gctgaattgatgaacagagttaatagctacaccgagctgaaggagaatgtggggcgtcga
attaatgtgcttattaccagaataaatgaagaaactaatgacttgatacttagtgagaag
gaagcttggcaaatgttaaatctgcaagaggggactcttgtggaaggaacagtgaaaaga
ctttttccctttggcgcacagataaggcttggtgaaacaaaccgaagtggcttgctacac
atctcaaatgtcacccaagccaaggttacttccatgagtaacttgttagcagttgatgag
aaggtgaaagttatggttgtgaagtcaatgtttcctgataaaatatctctcagtatagca
aaccttgaaagcgagccagggttatttttatcggacaaggagagagtattttctgaagca
aaacagatggcgaagaagttcagacagaacctaccaactgtttcagcaacaaagaaaccg
gaaccccttccaaccgacaggctaccatttgaagatgaagaaaatatgtatgctaattgg
aaatggttcaagtttgatagggataatgtaaacatggaataa
DBGET
integrated database retrieval system
