Solanum lycopersicum (tomato): 101263336
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Entry
101263336 CDS
T02665
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101263336
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101263336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Apolipo_F
AAA_27
Motif
Other DBs
NCBI-GeneID:
101263336
NCBI-ProteinID:
XP_004244563
UniProt:
A0A3Q7IEM5
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Position
8:complement(2670863..2686506)
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AA seq
792 aa
AA seq
DB search
MEEDAGERSSFVAGFIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
VIIVSPNKLAADGMVGVSQLADRVCSSTKKVIMARGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVIITNHSLLVTFNGSFDHMNIDSTSVQNLEIIEP
MHASLLGTNNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASDNGRRSQIMISSIILLKTALDAL
PLLSKVLKEAKSCLLGNVYKTICENEKYTSISKRIGEVIDDDVLHTRVPFVARTQQCFAV
KAGADGLLDMARRSFCDTSEAIHSLANKYRQDFKLPNLKIPFNNRQGFYFSIPQKDIQGK
LPSKFIQVVKHGNNVRCSSLELASLNVRNKSAAKECWLRTALCLEALMDAIREDVSVLTV
LSEVLCLLDMMVNSFAHTISTKPVDRYTRARFTCDGPLAIDSGRHPILESIHNDFIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLMVILAQIGCYIPARFATLRVVDRIFTRMGTMD
SLESNSSTFMTEMKETAFIMQNVSHRSLIVMDELGRATSSSDGLAIAWSCCEHLLALKAY
SIFATHMENLSALSTMYPNVKILHFDVDVRNNRMDFKFQLKDGSRHVPHYGLMLAGVAGL
PSSVVETAKRITSRITEKEMKRMEVNCRQYEDVQLIYRVAQRLMCLKYSDQDEDSLREAL
QNLKENYIGGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgccggagaaagatcaagcttcgtcgccgggttcattgagaaccgagcc
aaggaggttggagtagctgcatttgatttgagatcagcatcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacagttctatgaacctatg
gtgataattgtttcccccaataaactggcggcggatggaatggtcggagtctcacaactg
gcagacagagtttgttcctccacaaaaaaggttataatggcccgtggttgctttgatgat
accaggggagctgtactggttaaaggtttagctgctaaggaaccgtctgctcttggtctg
gattcatactacaagcaatactatttgtgcttggctgcagcagctgcaactatcaagtgg
atcgaagcagagaaaggtgttattataacaaatcactctttgctggttactttcaatgga
tcttttgaccacatgaacattgattccaccagtgttcagaacttggagataattgagcct
atgcacgcttctcttctgggcacaaacaacaaaaagagaagtttattccacatgcttaaa
acaactcgaactattggagggactagacttctgagggcaaatcttttgcagcctctgaaa
gacatagagacaattaacactcgactcgactgcctggatgagttgatgagcaatgaacag
ctattctttggtttgtctcaggcccttcgtaagtttccgaaagaaacagatcgggtcctt
tgtcacttctgcttcaaaccaaagagagttactaatgaagtcttggcttcggataatgga
agaaggagccagataatgatatccagcattattcttctcaaaacagctcttgatgcttta
ccgttactctccaaggttcttaaagaagccaagagttgtctgcttggaaatgtgtacaaa
accatatgtgagaatgaaaaatatacttcaataagcaaaagaattggagaggtgattgat
gatgatgtccttcatacgcgagttccttttgtggcacggacacagcagtgttttgctgtt
aaggctggagcagatgggcttcttgatatggctcgacggtcattctgtgatactagcgaa
gctatacacagtctcgcaaataagtatcgtcaagatttcaaactgccgaacttgaagatc
ccattcaataacaggcaagggttttactttagcattccacagaaggacatacagggaaaa
ctgcccagcaagttcatccaggtcgtgaaacatggaaacaatgtccgttgctcgagtctt
gaacttgcttcattgaatgtgaggaacaagtctgcagctaaagaatgctggttgaggact
gctctttgtcttgaagcattaatggatgcaatacgagaggatgtctccgtgcttactgtt
ctttcagaagtgttgtgccttttagatatgatggtaaattcatttgctcacactatatca
acgaaaccagttgatagatatactagagctcgttttacatgtgatggcccattggcaatt
gattctggacggcaccccattctggaaagcatacacaatgatttcattccaaatggcatc
tttctttctgaagcatcaaatatggctattgtaatgggcccaaacatgagcggaaaaagt
acttatcttcagcaagtttgtttgatggtcatccttgctcaaattggttgctatattcct
gctcgatttgccactttgagggtggtcgatcgtatttttacaaggatgggaacaatggac
agtctcgaatcaaattctagcacgttcatgacagagatgaaggagacggcttttatcatg
caaaacgtgtcccatagaagtttgattgttatggatgaactggggagggcgacctcatcc
tctgatggactcgcaatcgcgtggagctgttgtgagcatctattggcacttaaagcgtac
tcaatatttgctactcatatggaaaatctatcagcgctatccacaatgtatccaaatgta
aaaattcttcattttgatgttgatgtgaggaataaccgcatggacttcaagtttcaactg
aaggatgggtcacgtcatgtgccacattacggcctcatgctagcaggagtagctggatta
ccaagttcagtagtggagactgccaaaagaatcacatctaggatcacagagaaggaaatg
aagagaatggaggtgaactgcagacagtacgaggacgtacaattgatttaccgtgtagct
caacggctgatgtgcttgaaatattctgatcaggatgaagattctttaagggaggctctg
cagaaccttaaggaaaactatattggtggaaggctttag
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