KEGG   Solanum lycopersicum (tomato): 101263390
Entry
101263390         CDS       T02665                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101263390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101263390
   03041 Spliceosome [BR:sly03041]
    101263390
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101263390
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101263390
Spliceosome [BR:sly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101263390
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 101263390
NCBI-ProteinID: XP_004235586
LinkDB
Position
3:66623267..66627450
AA seq 376 aa
MDYVAEQNFSEEQERNDGSAGHELKHSLDDSSAGKLFVGGIAWETREESFRKYFSRFGEI
TDCVIMMDKVSGRPRGFGFVTFADPEAANKVLEEEHIIDGRTVEVKRTVPKEDMQVKGSP
KTKKIFVGGLPLTLTEDELKEYFSSYGHVLEQQIMLDRESGRSRGFGFITFDSENAVEEV
LNNGRMHEIHGKQVEIKRAEPKRAGAENAIESRQHRGGSGSRSYNNFGGSEGAYGGGYSR
GYGGYGGYGGGAGYGGGGAGAGYGGYGNIGGSYGGGGAGYFSGYGGYGYGFGFSGAMYGA
AGYGATSYGAPGSYGGAAGYGSGRGYTSSDDGSWYGGARSSASFNAKGYESGGSTGGARA
YGNGGAAGGRFHPYRN
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggattatgtagctgagcaaaatttctcagaagagcaggaacgaaacgatggtagtgca
ggacatgaattaaagcattcactcgatgattcttctgcaggaaagcttttcgtcggaggc
attgcttgggagaccagagaagaatcttttaggaagtatttcagcaggtttggagagata
acagattgtgtaataatgatggataaggtctctggaaggccacggggattcggctttgta
acatttgcggacccagaagctgcaaataaggttttagaggaagagcacatcatagacggt
agaacggtggaagtgaagaggacagtacctaaggaggacatgcaagttaaaggatctccg
aaaacaaagaaaatttttgttggcggtcttccattaactttaactgaagatgagttgaag
gaatatttttcttcttatggccatgttctggagcaacaaatcatgctggaccgtgagagt
ggtcgatcccgaggctttggttttattacttttgatagtgaaaatgccgttgaagaagtt
ctaaacaatggccgtatgcatgaaatccatggcaaacaagttgaaattaagagggctgag
ccaaaaagagctggtgctgaaaatgcaattgagagcaggcagcatcgtggtggcagtggt
tcaagatcgtataataactttggtgggtctgaaggagcgtatggtggtggatacagtaga
ggttatggtggatatggaggctatggcggcggcgctggttatggcggtggcggcgctggt
gctggctatgggggttatggaaacattggaggaagttatggcggaggcggtgcaggatat
ttctctggatatggtggatatggttatggatttgggtttagtggagctatgtatggggca
gctggatacggagccactagctatggtgctcctggaagctatggtggtgctgctgggtat
ggtagcggtagaggatacacaagcagtgatgatggtagctggtatggtggggctagaagt
tctgcatcttttaatgctaaagggtatgaaagcgggggtagcactggaggtgctagagca
tacggtaatggtggtgctgcaggtggaaggtttcatccttacaggaattga

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