Solanum lycopersicum (tomato): 101263446
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Entry
101263446 CDS
T02665
Symbol
SLSINA1
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101263446 (SLSINA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101263446 (SLSINA1)
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101263446 (SLSINA1)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101263446 (SLSINA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
101263446
NCBI-ProteinID:
XP_004228679
UniProt:
A0A3Q7E8S5
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All DBs
Position
1:complement(1176932..1184854)
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AA seq
308 aa
AA seq
DB search
MAPGGSNYQDIGDSRSAYSDYGIAPESAEFKNSPFRKAAAVIGGKNGVGSNSAVHELLEC
PVCMNPMYPPIHQCPNGHTLCVKCKSKVHVCPICRHELGNIRCLALEKIAESLELPCRYQ
IYGCQDIFTYHTRLRHEQNCRFRPYNCPYAGSECAVTGDIQYLVAHLKDDHKVDMHDGCT
FNHRYVKSNPQEVENATWMLTVFNCFGHQFCLHFEAFNLGLAPVYMAFLRFMGDDDDAKR
FSYSLEVGGFGRKLTWQGVPRSIRDSHKTVRDSLDGLIIQRSMALFFSGGDRKELKLKVA
GRIWREPL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggaggcagtaactaccaggatattggtgattcccgcagtgcatattctgac
tatggtattgcaccagaaagtgctgagttcaaaaactccccctttagaaaagctgcagct
gttattggtgggaagaatggagttggatctaatagtgctgttcatgagctacttgaatgc
cctgtttgtatgaatccaatgtatccaccaattcaccagtgtccaaacggccacacgtta
tgcgtgaagtgcaagtcaaaagtacatgtgtgtccaatttgccgccatgagcttggaaac
ataagatgtttagcactggaaaaaattgctgagtcactagaattgccgtgccgataccaa
atttatggctgtcaagatatattcacttatcatactaggcttcgtcatgagcagaactgc
agatttcgaccatacaattgcccatatgcaggatctgaatgcgctgttaccggtgatatt
cagtacctcgttgcacacctaaaagatgatcacaaagttgatatgcatgatggctgtacc
ttcaatcatcgttatgtcaaatctaatcctcaagaagttgagaatgctacatggatgttg
acggtttttaactgtttcggtcaccagttctgcctgcactttgaggctttcaatcttgga
ttggcaccggtatacatggcattccttcgttttatgggtgatgatgatgatgcgaaaaga
tttagctatagtcttgaagtaggtggatttggcagaaagttaacatggcagggagtaccg
aggagcatccgtgatagtcataaaactgtccgagacagtttagacgggctgattattcaa
aggagcatggcactcttcttctctggtggtgacaggaaggagctgaagctaaaggtagct
gggcgtatttggcgagagccattgtaa
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