Solanum lycopersicum (tomato): 101263458
Help
Entry
101263458 CDS
T02665
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101263458
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101263458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
101263458
NCBI-ProteinID:
XP_004247105
UniProt:
A0A3Q7IZ83
LinkDB
All DBs
Position
9:57397797..57401943
Genome browser
AA seq
439 aa
AA seq
DB search
MAIYWRSCLSLSALLILVLLVINVNPSHSAEEAEQFQSLKNLTMTNSLSEENVPNHEHAV
DDPEKVVSMVDMSIKNSTERRKLGFFSCGTGNPIDDCWRCDRNWQRNRKRLADCAIGFGR
NAIGGRDGKYYVVTDPNDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSF
KTIDGRGVNVHIANGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPSHFGWRTIADGD
GISIFGSSHIWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDK
IMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP
ANPFAKQVTHRVEQSDVWKHWNWRSEGDLMLNGAFFTPSGHGAAASYARASSLAAKASSL
VGTLTSNAGALTCRRGYQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttattggagatcgtgtctctctctttctgcattgctaattttggtgctacta
gtcatcaatgtcaaccccagtcacagtgctgaagaagcagagcaattccagagcttaaag
aacttgacaatgacgaatagtttaagcgaagaaaatgtaccaaaccatgaacatgctgta
gatgatccagaaaaggtggtttcaatggtagatatgagcattaagaatagtacagagagg
aggaaattgggttttttctcatgtggaactggaaatcctattgatgattgttggcgttgt
gaccgtaattggcaacgtaaccgcaagcgcctagctgattgtgctattggattcggacgt
aatgctattggtggccgtgatggcaagtactatgttgtcactgacccaaacgatgatgac
cctgtaaatcccagacctggaacacttcgtcatgctgtaattcaggacagaccgttgtgg
attgtgtttaaacgagatatggttattacacttaaacaagagctaattatgaacagtttc
aagacaattgatggccgtggtgtcaatgttcatattgccaatggggcttgtataaccgtc
caatttgttactaatattattattcatggcatcaatattcatgattgtaaaccaactggt
aacgccatggtacgtagttcaccaagtcactttggatggaggacaattgctgatggagat
ggcatttccatttttgggtctagccatatttgggttgatcacaactctcttgctaactgt
gctgatggcctaatcgacgcgataatgggatcaactgctattaccatctccaacaattat
tttacacaccataatgaggtgatgttattaggccacagcgactcctatgttagagataag
attatgcaggtgactattgcttacaaccattttggtgagggtcttattcagagaatgcca
aggtgtagacatggttattttcatgtggtgaacaatgactatacacattgggagatgtat
gccattggtggcagcgcgtctcctacgataaacagccaaggcaacagatatctcgctccg
gccaacccttttgccaaacaggtgacacatagagtggagcaatcagatgtgtggaagcat
tggaactggagatcagagggagaccttatgcttaatggagccttctttacgccatctgga
cacggtgctgcagccagctatgctagggcttcaagcttagcagcaaaggcctcttccctg
gttggcactcttacttcaaatgctggtgcacttacatgtcgcaggggctaccaatgttaa
DBGET
integrated database retrieval system
