KEGG   Solanum lycopersicum (tomato): 101263479
Entry
101263479         CDS       T02665                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101263479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101263479
   03041 Spliceosome [BR:sly03041]
    101263479
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101263479
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101263479
Spliceosome [BR:sly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101263479
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_Nup35 BRAP2
Other DBs
NCBI-GeneID: 101263479
NCBI-ProteinID: NP_001315149
UniProt: A0A3Q7FDP2
LinkDB
Position
2:70576084..70579796
AA seq 389 aa
MEEQNGTVNGVKIKLEEEETNDDLRTTPDHQNDAGASQPLTGDGASPGKIFIGGLARETT
SAQFVKHFGKYGEIIDSVIMKERRTGQPRGFGFVTYADPSVVDKVIEDDHVINGKQVEIK
RTIPRGGGSSSKDFKTKKIFVGGIPTTISEDEFRDFFLKFGEVKEHQIMRDHSTSRSRGF
GFITFDTEKSVEDILANGNKLDFSGTQVEIKKAEPKRPNAPQPAPFRRQGNPRAAFGGGF
SDAYGGYGDSGYGVVAGPGPGPYRSGGPYGGRSSAFGGYSGGGMGGYGAYGGGGAYGGGF
REEASFGYSSRYGSGAFGRGYDVGGGYGGAGEGYGGYGAGGGGYGSGYGAAGLGSGYGGD
SAGGSMYGSSRGSYGGAGAGSGRYHPYGR
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggaacaaaatgggactgtaaatggtgttaaaatcaagctggaggaagaagaaact
aatgacgaccttagaactactcccgaccatcaaaacgacgccggcgcttctcagcctctt
accggagatggtgctagtcctggaaagatttttattgggggcttggctagagagacaact
tcagctcaatttgtcaagcacttcggtaaatatggtgaaattattgattccgtgattatg
aaggaaaggcggacaggacagccacgtgggtttggttttgtgacttatgctgacccatcc
gtggtagataaagtcattgaggacgaccatgttataaatggaaagcaagtggaaatcaag
cgaactatacctagaggaggaggttccagctcaaaagatttcaagacaaagaagattttt
gtgggcggtatcccaacaacaattagtgaagatgagttcagagacttctttttaaagttt
ggagaggtgaaagagcaccagatcatgcgtgaccattctactagtcgttctcgtggcttt
ggattcatcacttttgacacagaaaaatctgtcgaggatatcttggctaatggaaacaag
cttgatttttctggaacccaggtggaaatcaagaaggctgagcccaagagacctaatgcg
ccacaaccagccccattcaggcgtcaagggaatccaagagctgcatttggtggtggattt
tcagatgcttatggtggatatggagactctggttatggtgttgttgctggtcctggtcct
ggtccttacaggtctggtggcccctatggtggcagatccagtgcatttggtggatatagt
ggaggaggaatgggtggatatggagcatatggtggcggtggtgcctacggaggaggtttc
agggaggaggcttcttttgggtattctagccgttatggcagtggagcctttggtagaggc
tacgatgttggtggtggatatggaggagcaggtgaaggttatggaggatatggtgctggt
ggcggtggatatggcagtggatatggtgccgctggtcttggcagtgggtatggaggagat
agtgcaggaggttcaatgtatggaagcagtagaggaagctatggtggtgctggtgctggt
tcaggcagataccacccttatggaagatag

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