KEGG   Solanum lycopersicum (tomato): 101263485
Entry
101263485         CDS       T02665                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101263485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101263485
Spliceosome [BR:sly03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101263485
 Complex B
    101263485
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 101263485
NCBI-ProteinID: XP_004233511
UniProt: A0A3Q7EYR9
LinkDB
Position
2:50995948..51005718
AA seq 560 aa
MPDYEANGEDIDNSGSSPLPKSRSSHGGTNPDNFTDSKPQHSSREYEKDKSSSRSREKDR
EKGRDRDRDRGRERDKDRDRERDKDRDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDY
DKQRDHDKDRESRHRHRSRSRGRSEHKSRSRSRSRSKSKRISGFDMAPPTTAMLPGATAA
AGQVPGTSPGIPGMLPNMFPLTSGPFGALPVMPIQAMTQQATRHARRVYVGGLPATSNEQ
SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA
PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA
QIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR
RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPGALATKVLCLTQVVEVDELSNDEDYQD
ILEDMRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVFLEYGDVESASKARQSLNGRKFGG
NQVIAVFYPENKFYEGDYDG
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgccggactatgaagccaatggagaagacatagacaattccggctcttctccccttccc
aaatccagaagtagccatggcggcactaatcccgataatttcaccgactccaagcctcag
catagttctcgtgaatatgaaaaagataagagctcgtcaagaagcagggaaaaggatagg
gagaaagggcgtgatagggaccgtgacaggggcagggaaagagacaaagacagggacaga
gagagggacaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgacaga
agggagagggagaggaccagagatagagatgatgatgaacgtcatcgaactcgagattat
gacaagcaaagagatcatgacaaagatagagagagtcggcatagacacaggtctcgttca
aggggtagatctgagcataaatcaaggtctcgatctcgttctcgatccaagagcaaaagg
attagtggttttgatatggcacctcctaccactgcaatgttacctggtgctacagctgct
gcaggtcaagtgcccgggaccagcccaggaattcctggaatgttgcccaacatgtttcct
ttaacatcgggcccgtttggagctcttcctgttatgccgatccaggcaatgacacaacag
gctacaaggcatgcccggcgagtttatgtcggtggacttcctgctacttcaaatgaacag
tctgttgcgaccttctttagtcatgttatgtctgcaattggaggaaatacagctggtcca
ggtgatgctgttgtcaatgtctatataaactatgagaagaagtttgcttttgttgaaatg
agatctgtagaggaagctagtaatgccatggcattggatggcatcatatttgagggtgca
ccttgtaaggtcagaagacccagtgattacaacccttctctggctgctactcttggtcct
agccaaccaaacccaaacctcaacctggcagctgttggattgtcaccaggttctgcagga
gggcttgaaggccctgatcgtatttttgttggtggtttgccctactatttcacagaagca
cagattagggagctgttagagtcttttggtgcacttagaggattcgatttggtcaaagat
agagaaacagggaactcaaaaggctatgccttttgtgtctatcaggatgtttccgttact
gatattgcttgtgcagctctcaatgggattaagatgggtgataaaacccttactgttagg
cgtgctaaccagggtacaacacaacctaagcctgagcaagagagtgtattgttgcatgca
caacagcagatagctttgcagagacttatgttacaacctggtgcattagccacaaaggtt
ttgtgtttaacacaagttgttgaggtagatgagctcagtaatgacgaggactatcaagat
attttagaagacatgagaactgaatgtggaaaatttggtccactggtgaatgtagtaatt
ccacgtccaagtcctgatggtgagcatgcaccaggggttggaaaggtatttttggagtat
ggagatgtggagagtgccagcaaagctcggcaaagtttgaatggaagaaaatttggtggc
aaccaagttatagctgtcttctatccagaaaacaagttctatgaaggggactatgatggt
tag

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