Solanum lycopersicum (tomato): 101263568
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Entry
101263568 CDS
T02665
Name
(RefSeq) WD40-repeat domain-contaning protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101263568
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
90S particles
Other 90S particles
101263568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
VPS8_N
WD40_like
TEA
Motif
Other DBs
NCBI-GeneID:
101263568
NCBI-ProteinID:
NP_001316669
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Position
2:55798024..55807342
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AA seq
516 aa
AA seq
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MKNLKKKKASAQNTQKGSKKRFSIESDPFFHEDNDLKRRKRFGDDEDIESSDDSEDIYGS
DDEGVDRNERKDEEEEEEEETAAEKRKRLAETFLHSMRESKRKEEEERESEEEYDREERE
AMRDSWMVDMLQKEQMEGSGRSRKAIASRIQKPTEGFHLLVKHRQSVTAVTLSEDDLKGF
SSSKDGTIVCWDVDSGKTEKYTWPTDEALKSHGAKDPQGRATKHSKNVLALAVSSDGRYL
ASGGLDRHVHLWDIRTRQHIKAFPGHKGPVSCLTFRQGSSELFSGSFDRSIKIWNVEDRA
YVNTLFGHQSEVLTIDSLRKERVLTVGRDRTMHLWKVPEESQLIFRAPATSLECCCFINN
DEFLSGSDDGSIEHWNVTRKKPVHIVKNAHASLQSVGIEQSNGALSNGHMENGTLNPQCH
SSSALSWVSALTVCRNSDLAASGAGNGSVQLWTIENESKGISPLFELPVAGFINSLVFSK
SGQFLVAAVGQEPRLGRWGRIADVRNGVFVHPLKHS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgaaaaagaagaaagcttcagctcaaaacacccagaagggtagtaagaag
agattttcaattgaaagcgacccatttttccatgaagacaacgacttgaaaaggcgaaag
agatttggagatgatgaagatatagagagcagtgatgattcagaggacatttatgggtct
gatgatgaaggagtggataggaatgagcggaaggatgaagaagaggaagaggaggaggag
acggcagctgagaagagaaaaaggctggcggagacttttttgcatagtatgagggagtcg
aagaggaaggaagaggaagaaagagagagtgaagaggaatatgatagagaggagagggaa
gcaatgagagactcatggatggtagacatgttgcagaaggagcagatggagggcagtggt
cgttccagaaaagctattgcttccaggattcaaaaacccaccgagggatttcacctttta
gtgaaacatcgacagtccgtaactgctgtgactttatctgaggatgacttaaagggattt
tcatcttctaaagatggcactattgtttgctgggacgtggacagtggaaagacagaaaag
tatacatggcctactgatgaagctctgaagtcacatggtgcaaaggacccacaaggtcga
gcaacaaaacatagtaagaatgttttagctttggctgtcagctctgatggacgctatttg
gcaagtggaggcttagatcgtcacgttcatttgtgggacatccgaacacggcagcatatt
aaggcattccctggtcataagggacctgtttcatgtttgacattcagacaaggatcttct
gaactgttttcggggtcgtttgatcgatccatcaagatatggaatgtggaagatagagct
tatgtaaatactttatttggtcatcaaagtgaagttctaaccattgattctttgaggaaa
gaaagggtcttgacagttggacgagaccgaaccatgcacttatggaaggttccagaggaa
tctcaattgatatttcgtgctccagcaacttcccttgaatgctgttgtttcatcaataat
gatgagtttctatctggttctgatgatggaagtattgagcactggaacgtaacaaggaag
aagcctgtccacattgtaaaaaatgcacatgcttcattgcaatcagtgggaattgaacag
agcaatggggccctatcaaatggccacatggaaaatggcacacttaatcctcagtgtcat
tcctcatcagcactctcttgggttagtgcgctgacagtctgcagaaatagtgatcttgca
gcatcaggagctggcaacgggtccgttcaattgtggactattgaaaatgaatcaaaaggc
atctctccattgtttgagctcccagtggctggatttataaattccttagttttttcaaaa
tcaggacagttcttggttgctgcagtagggcaggaacctcgcctaggaaggtgggggcgt
attgctgatgttcgaaatggagtttttgtgcatcctttgaagcattcgtga
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