Solanum lycopersicum (tomato): 101263614
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Entry
101263614 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101263614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101263614
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101263614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TB2_DP1_HVA22
DUF1350
Motif
Other DBs
NCBI-GeneID:
101263614
NCBI-ProteinID:
XP_004240300
LinkDB
All DBs
Position
5:59626598..59628308
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AA seq
281 aa
AA seq
DB search
MNNNLRPLTSLECRYRAEELIKNLHESNNGEEVLIQLNNFIMQQAISEVMCMDLGFQLWN
SPVTVTILLQEVVAVYPNFLNSTLTMKESARISNALIVFLCMAYHPKARMGLLKANIPYY
LYPFFQISTNVMKPLQFSILSLIAALAEFDEKYGQDTLLLFLDTQVFPLCLHCIRHGDQP
IRCNTHPYENLDARKGLKYCCALPSRCLSVIQVLHQLVDTFASEIPCSQQLKYVVQCYLS
LPRVAWAGGVYERVREMVPLQLIENTFQNIIEHVIPSSSFF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaataataatctgcggccgttaacatctttagagtgtcgttacagggcagaggaattg
ataaagaatcttcatgagagtaataatggcgaagaggttcttattcaactcaataatttc
atcatgcaacaggcaattagtgaagtaatgtgcatggatcttggatttcagttgtggaac
tcccctgttacagtcaccatacttttacaggaagtagtagcagtgtaccccaacttctta
aactcaacattaaccatgaaggaatctgctcgaatttctaatgctcttattgtatttctg
tgtatggcgtatcacccaaaggcaagaatggggctcctcaaagcaaacataccatattat
ctttacccctttttccaaatttcaacaaatgtgatgaagcctctgcaatttagcatcttg
tctcttattgctgccctagcagagttcgatgagaaatatgggcaagacactcttctttta
tttctagatacacaagtatttcctttatgcctgcattgtatccgtcatggtgatcaacca
atacgttgcaacactcatccttatgaaaatcttgatgcaagaaaagggctaaaatattgt
tgtgctcttccctctcgttgtctgtccgtgatacaagtcctgcatcaactggtagacaca
tttgcttctgaaatcccttgctcacagcagctaaaatatgttgttcaatgctacctaagt
cttccacgagtagcatgggcaggcggggtatatgaaagagtgagagaaatggttcctcta
caactaattgaaaacacttttcagaatattattgaacatgtaattccatcgtcttctttc
ttctga
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