Solanum lycopersicum (tomato): 101263723
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Entry
101263723 CDS
T02665
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00450
Selenocompound metabolism
sly00970
Aminoacyl-tRNA biosynthesis
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101263723
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101263723
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101263723
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101263723
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
101263723
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101263723
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101263723
Prokaryotic type
Other AARSs
101263723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
101263723
NCBI-ProteinID:
XP_004242831
LinkDB
All DBs
Position
7:complement(5836967..5846691)
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AA seq
812 aa
AA seq
DB search
MGDSSTAGNGDNLPPVSPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYC
RLRDYNIIYMCGTDEYGTATETKALEENCTPKQICDKYHAIHREVYKWFNISFDHFGRTS
TPQQTEVCQAIFKKLWENNWLSENTMQQPYCETCKKFLADRLVEGNCPTPGCNYDSARGD
QCEKCGKLLNPTELKDPRCKVCRNTPCIRDTDHLFLELPLLKDELEAYVNDLSVAGGWSQ
NAIHTTHAWLREGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTTEW
EKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTRENWTLMKTISVTEYLNYEAGKFSK
SKGVGVFGNDAKETNIPVEVWRYYLLTNRPEVSDTLFSWVDLQAKLNSELLNNLGNFVNR
VLSFIAKDPASGYGSIIPNPEGAESHPLTKALGEKVGNYVEEYIEAMEKVKLKQGLKIAM
SISGEGNGYLQESQFWRLYKEDKPSCSIVMSTASGLVYLLACLLEPFMPSFSREVLKQLN
FPPETKPSLSDDRGDIEKSKRPWHILPAGHKIGIPTPLFKELKDEEVEFYREKFAGSQAD
RNLKAETEARKITDQLHKAKISDANKKKERATKSSEAKAKGSASVEAEISISRLDIRVGL
ITRAQKHPDADSLYVEEIDVGEAQPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPASMRGI
KSQAMVLAASNSDHTKVELVEPPKDAAIGERVTFPGFDGKADDVLNPKKKVWETLQVDLH
TNKELVACYKDLPLTTSVGVCKVTSISEGSIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcttccaccgccggcaacggagacaatctcccgccggtctctcccaaactt
ccgattcccggcaaaagaaacatcctcatcacaagcgctttgccgtatgtcaacaacgtt
cctcatctcggaaacatcatcggaagtgtgttgagtgcggatgtcttcgcgagatactgt
agacttcgggattacaatatcatatacatgtgtggtactgatgaatatggcacagctaca
gagactaaagccttggaagaaaattgtactcccaagcaaatttgtgacaaatatcatgca
atccatagagaagtgtataaatggtttaatataagctttgatcactttggacgcacatca
actccgcaacagaccgaagtttgtcaggcgatcttcaaaaaactctgggagaataattgg
ctctctgagaacaccatgcaacagccgtactgtgagacatgcaaaaagtttttggctgac
cggcttgtagagggtaactgtccgacaccaggttgcaactatgattctgcacgaggagat
caatgtgagaagtgtgggaagctcttaaatcccaccgaattgaaggatccaagatgcaag
gtttgccgtaacactccatgcatccgagatacagatcatttgtttcttgagctccctttg
ctgaaggatgaattagaagcatacgtcaacgacctgtcagtggctggaggatggagtcag
aatgctatccacactacacatgcttggcttagagaaggactgaagccaaggtgtataact
agagatttgaaatggggggttccagttccacatgaaaaatataaggacaaggttttttat
gtgtggtttgatgctcctattggatatgtatctataacctcatgctacacaactgagtgg
gagaagtggtggaagaatccagagaatgtggagctctatcagtttatgggcaaagataat
gtgccttttcacactgtgatttttccatctacgcttcttggaactcgtgaaaactggact
cttatgaagactattagtgtaacagaatacttgaactatgaagcaggcaaattctcaaag
agcaagggcgtaggagtatttggtaatgatgcaaaagagacaaacattcctgtagaagtt
tggagatattacttgctaacaaacaggccggaggtgtcagacactttgtttagttgggtg
gatttacaagcaaagctgaacagcgagttgctaaacaacttaggcaatttcgtcaataga
gtcctgagtttcattgcaaaagatccggcttcaggttatggttccataattcccaaccca
gaaggagctgaatcacaccctttaactaaggcattaggtgaaaaagttggaaattatgtg
gaagaatatatagaagccatggagaaggttaaattaaagcagggcttgaagattgctatg
tccatttctggagaaggaaacggttatttgcaagagagccaattctggagactttacaag
gaagataagccttcttgttccattgtgatgagcactgcttccggcctagtatatcttctt
gcatgtcttttagagccatttatgccatccttttcacgggaggtgcttaagcagcttaac
tttcctcctgaaacaaaaccttcactgtctgatgacagaggtgacatagaaaagagcaaa
agaccatggcatatcctacctgcaggtcacaaaattggaataccaacaccattgttcaaa
gaactgaaagatgaagaagttgaattctacagagaaaagtttgctggaagtcaggcagat
aggaatttgaaggctgaaactgaggcaaggaagatcactgatcagttgcacaaagcaaaa
atatcagatgctaataagaagaaagaacgtgctacaaaatcttctgaagccaaagctaag
ggttcagcctctgttgaagcagaaatttcgattagcagacttgatattcgtgttggtctc
attacaagagcacagaagcatcccgatgctgattctttgtatgttgaagagattgatgtt
ggtgaagctcagcccagaactgtcgttagtggcctcgtaaaatatattcctctggaggaa
atgcagaatcgaaaggtctgtgttctatgcaacctaaaaccagccagcatgaggggcata
aaatcccaggcaatggttcttgctgcttctaatagtgatcacactaaggttgaactagtt
gagccgcctaaggatgctgcaattggtgaacgagttacgttccctgggtttgatggcaag
gcggatgatgtcttgaatcctaagaagaaggtttgggaaactcttcaggtggatctgcac
acaaataaggagttggttgcttgctataaagatttgccactcaccacttctgttggtgtt
tgcaaggtcacatccatttctgaaggatcgattaggtaa
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