Solanum lycopersicum (tomato): 101263734
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Entry
101263734 CDS
T02665
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101263734
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101263734
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
UBA_4
UBA_8
TAP_C
CCDC47
TMEM100
EKLF_TAD2
Thioredoxin_7
DUF4778
CDC45
Motif
Other DBs
NCBI-GeneID:
101263734
NCBI-ProteinID:
XP_004244648
UniProt:
A0A3Q7HID1
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Position
8:3685880..3696039
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AA seq
504 aa
AA seq
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MNSFPSFSISLSPGHFIEQVVVKTLNFFRNCKHNRKNLEQERSEMGDVADKVAYFQAITG
LDDPDLCAEILTAHNWDLELALSNFTSNPRAAADADASEATTSSTNPEQVETGLVGAAGG
PPGLAWKIVTLPFSIISGSLGLVSGAVGFGVWAVSGVLSYGLGMIGLNSGRNGESSSSTR
LLSVSAAVSEAMDFVACFERDFGSIRPNFVAEGFMDALQRSRNEYKVLFVYLHSPDHPDT
PVFCERTLCNEDLVAFINENFVAWGGSIRASEGFKMSNSLKASRFPFCAVVMAATNQRIA
LLQQAEGPKSPEELLTVLQRVIEESAPVLVTARVEAEERRNNIRLREEQDAAYRAALEAD
QARERQRIEEQERLEREAAEAERKRKEEEEARERAAHEAAEREAALVKIRQEKLLSLGPE
PEKGPDVTQVLVRFPTGERKERRFHCTTTLQSLYDYVDSLGCLAVENYSLVSNFPRTVYG
SEKLSLSLKDAGLHPQASLFIELS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttccatcgttctcaatttcactttctcctggacatttcatcgaacaggta
gtagtcaaaaccctaaacttcttcagaaattgtaagcataatcggaagaatttggagcag
gagagatcagaaatgggcgatgtagctgataaagttgcttattttcaagcgattactgga
cttgatgatcccgatttgtgtgcggagattctcactgcacataattgggatctcgaatta
gcgttatcaaatttcacttccaatcctcgtgctgctgctgatgcagatgcatctgaagct
actacttctagcacgaatcctgaacaagtagaaaccggacttgttggtgctgctggtggt
ccgccggggcttgcttggaagattgttacgttgccgttttcaattatttcaggtagttta
gggttagtttcaggtgcggttggatttggcgtgtgggcggttagtggtgttctatcgtat
gggttaggtatgattgggctgaattcgggacggaatggtgagtcgtcgtcgtcgacacgt
ttgttgtcggtatctgcagcggtatcagaagctatggattttgttgcgtgcttcgagagg
gattttggtagtataaggccgaattttgttgctgaaggttttatggatgcattgcagagg
tctaggaatgagtataaggtactgtttgtttatttgcattcgccggatcatccagatacg
cctgtgttttgtgagaggacgctatgtaatgaggatttggtggcgtttattaatgagaac
tttgttgcttggggtgggagtattagagctagtgaaggttttaagatgagtaatagcttg
aaggcgtcaaggtttcccttttgtgctgttgtaatggctgcaacaaaccagaggattgct
ctgcttcagcaggcagaagggccaaaatctcccgaagaattgcttacagtactgcaaaga
gtaatcgaggaaagtgcccccgtgcttgtcacagccagggttgaggcagaagaaagaaga
aacaatatacgtttgagggaggagcaagatgctgcttatcgtgctgcactagaagctgat
caagctagagagcgccagaggatagaagagcaagagaggctggagagggaagctgctgaa
gctgaaaggaaaagaaaggaggaagaagaggcccgggaaagagcagcacatgaagctgct
gaaagagaagctgcattagtaaaaatacgccaggagaagctattgtcattgggccctgaa
cctgagaagggtcctgatgttacccaggttttggtacggtttcctactggagagcgcaag
gagaggagatttcattgtactacaacattacagtcgttgtatgactatgtcgattctcta
ggatgcctagcggttgagaactacagtcttgtatccaacttccctcgcactgtatatggt
tcagagaagctcagtttgtccctgaaagatgccggattacatcctcaggccagccttttt
atcgaattgagctaa
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