Solanum lycopersicum (tomato): 101263737
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Entry
101263737 CDS
T02665
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
sly
Solanum lycopersicum (tomato)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
AAA_30
YgbB
ERCC3_RAD25_C
zf-CCHC_4
Cas3-like_C_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
101263737
NCBI-ProteinID:
XP_004244948
UniProt:
A0A3Q7IHN6
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Position
8:complement(27144886..27155250)
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AA seq
746 aa
AA seq
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MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFHVHVRLRRPFLASAVVT
PTSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNESNEDELSVSKLGLPHRLVDAL
EKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRG
RLPKVLVLAPTRELANQVEKEMKESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGR
LIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVK
KLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFT
QTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN
VDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSP
PSVKEVLESSAEHVVAALNGVHPESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPS
SRSLITHEQGWTTLQLTRDSETSRGFLSARSVTGFLSDVYSPAADEVGKIHLIADERVQG
AIFDLPEETAADLLNQELPPGNTISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGLRD
RRGRYSQGSSSGRYSDNDDDNWGNDSRSRGGRTRRGGSDWLISGDRDKRSSRSFSGGSRD
RSFGGACFNCGRSGHRASECPNKRDY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttcttccattataggagtttcctccatataccaaaccaatccttcactc
gaactttctcgaagacccactgctactcctcctctatctcttcctttctccattgaaaaa
tccaattttcatgttcatgttcgtctcagacgtccttttctggcttctgctgtagtaact
cctacttcttcggtgctaagtgaagaagcctttaaaggaattgggggttttgggaaggat
tctttgaatgttagtgaaagtgaatatgattctgaggatgaggttgaggataatgagtca
aatgaggatgaactttctgtttctaaacttggtttacctcacaggcttgttgacgctctt
gagaagcgtggaattactcaacttttcccaattcagagagctgttctagtgcctgcactg
gagggtcgggatataattgctcgtgcaaagacagggacggggaagacactcgcctttggt
attccagtattgaaaaagcttagtacagatgaagaaatgagaaatactcagagacgggga
cggcttcccaaagttttggtacttgcacctactcgagagttagccaatcaagttgagaag
gaaatgaaagagtcggcaccgtacttgaacacagtctgcatatacggaggcgtttcttat
gctacgcagcaaaatgcactttcccgtggggttgatgttgttgttggaactccaggtaga
cttattgacctgataaacaataacaccttgaaacttggggaggtggaatatttggtcctc
gacgaggctgatcaaatgctcgcagttggatttgaggaagatgtggaagttattttggaa
aaacttccaccacagaggcaaagcatgcttttctcagccaccatgcctggctgggtaaag
aaactgtctaggaagtacttgaacaatcctttgacaattgacttggttggtgatcaagat
gaaaagctggcagaggggatcaagctttatgctctatcagctacatcaacatcaaaacga
tctatacttggtgatcttgttacagtttatgcaaagggtggaaagacaattgtttttaca
cagacaaaacgagatgctgatgaggtttcaatggcattatcaaatagcatttcttctgag
gcattgcatggtgacatttctcaacatcagagggaaagaacactaaatggatttaggcaa
ggaaaattcactgtgcttgttgcgactgacgttgcatctcgtggtcttgatatacctaat
gttgacttagtaatccattatgaattacccaacgatccagaaacttttgttcatcgctct
ggtcgaactggccgtgctggaaaagaaggcattgctattctgatgtacacaggtagtcaa
aggcgaactgtcagatctctcgaacgtgatgttgggtgcaagtttgaattcgttagtcct
ccatctgtcaaagaggttttagagtcatcagctgaacatgtggtggctgcacttaatgga
gttcatcccgaatctgttgagtacttcattccaactgcgcaacagttgatggagcaacaa
ggagtgaattcccttgctgctgcacttgctcttttgggtggattttccaaaccgccatct
tctcgatctctaataactcatgaacaggggtggactacattacagctgacacgtgattct
gaaacttcccgaggattcctgtcggcaagatctgttactggtttcctctctgatgtctat
tcaccagctgctgatgaagttggcaaaattcacctaattgcagatgaaagggttcagggg
gccatctttgatcttcctgaggagactgctgcagatctactaaatcaggaattacctcct
ggaaatactatttccaagattaccaagttacctgctttacaagacgatgggccagctggt
gatttctatgggaggttttcaagcagggatactagggggacacgaggaggtttaagagac
cgtagaggcagatattcccagggttcttctagtggccgttactctgataatgatgatgat
aattgggggaatgactctaggtcgcgaggtggccggacaagaaggggaggaagtgattgg
ctgatcagtggtgatagggataagcgctctagcaggtctttttctggaggaagcagagac
agaagctttggtggtgcatgtttcaattgtgggcgcagtggtcaccgagcatctgaatgc
cctaacaaaagagactactag
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