Solanum lycopersicum (tomato): 101263839
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Entry
101263839 CDS
T02665
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit A-like
KO
K03254
translation initiation factor 3 subunit A
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sly03012
]
101263839
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
eIF-3
101263839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
PCI
CSN8_PSD8_EIF3K
Motif
Other DBs
NCBI-GeneID:
101263839
NCBI-ProteinID:
XP_010325878
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Position
9:4323580..4330617
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AA seq
956 aa
AA seq
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MATFAKPENALKRAEELITVGQKQEALQALHDLITSRRYRAWQKTLERIMFKYVELCVDM
RRGRFAKDGLIQYRIVCQQVNINSLEEVIKHFMHLATERAELARNQAQALEEALDVEDLE
ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSRLEALYAMTAH
RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSLPESLQLYLDTRFEQLKV
ATELSLWQEAFRSIEDIYGLMCMVKKTPKASLMGVYYGKLTEIFWMSSNHLYHAYAWLKL
FSLQKGFNKNLSQKDLQLIASSVVLAALSVPPYDQSYGASHLELENEKERSLRVANLIGF
EVEPKAENRVALSRSSLLSELVSKGVMSCVTQEVKDLYHLLENEFLPLDLALKVQPILNK
ISKLGGKLSSVSSVPEVQLSQYVPALEKLATLRLLQQVSQVYQTIQIDNISKMIPFFDFT
AIEKISVDAVRRNFLAIKVDHMKGLSSLANRVLRLKDSGIICLFXAESLSKARTMIYPPA
KKTAKLGDALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLEMERVEESKRRELQKMT
EDAEQKRIAAEYEQRRSQRILKEIEDRELEEAQAMLQEAEKRSKRKKKPILEGEKMTKQV
IMELALNEQLRERQEREKKLQKYAKTMDHLERAKREEAAPLIEAAYKQRLAEEAALHERE
QQQEVELSRQRHAGDLEEKKRLGRMLENKRILQERVVSSREAELNRLKQERRERISQIIQ
SRKQEREAKRKMLFFLRTEEERQKRLLEEEEARKREEAERRKKEEAERQAKLDEIAEKQR
LRMIELEEKERREKEEILRRPAVLPRPSEPQALGRPTELGGAAPVPAAAAAAPAAGKYVP
RHLRGNVDAAGQAPPPDTDRWGTGSKSDDRPSWRDERRPTSFGSSGSRTSWSSSRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttgccaaaccggagaatgctttgaagcgtgctgaagagttgatcactgtt
ggacaaaagcaagaagcccttcaagcacttcatgatcttattacttcaaggaggtataga
gcatggcaaaagactcttgaaaggataatgttcaagtatgttgagctatgtgttgacatg
agaagggggaggtttgccaaggatggcctaattcaatatcgtatcgtctgtcaacaagtg
aacattaactccttagaggaggtaataaagcacttcatgcatttagctactgagcgagct
gaactagctcgcaatcaggcacaagctcttgaggaagctctggatgtggaagacttggag
gctgataaaaggcctgaagatcttatgttgagttatgttagtggggagaaaggaaaagat
cgatctgatcgggagcttgtcactccctggtttaagttcttgtgggagacatatagaact
gttctggagatcttgcgtaacaactcaagattggaggctctgtatgcaatgacagcacac
cgagcctttcagttctgtaagcaatacaagcgtacaacagaatttcgccgtctttgtgaa
atcatcaggaatcatttggcaaatctcaacaagtatagagatcagagggaccgtcctgat
ctgtctcttccagaaagtctgcaattgtatctagacactagatttgaacagctgaaagtt
gctactgaactgagtctatggcaggaagcttttcgttccattgaggacatatatggtttg
atgtgcatggttaaaaaaactcccaaggcgtcattaatgggtgtttactatggaaagctt
actgagatattttggatgtcatcaaatcatctttatcatgcttatgcctggctcaagctt
ttctctcttcagaagggttttaataaaaatttaagccagaaggatttgcagttaatagca
tcgtctgttgtcctagctgcactttcagtgcctccttatgatcagtcttatggtgcatct
catcttgagcttgaaaatgagaaggagaggagtttgagggtggccaatctaattggtttt
gaagttgaacccaaagccgaaaacagagtggcgctttctcgatcatcacttctctcagag
ttggtgtccaaaggtgtgatgtcctgtgtcactcaagaagtgaaagatctttatcatctg
ttagaaaatgagtttcttcctttggatctggcactgaaggtgcagcccatattgaataaa
atatcaaaacttggtggtaagctgtcttcagtttcttcggttcctgaagtgcaactgtct
cagtatgttcctgccttagaaaagcttgctactctgaggttgctccagcaggtctctcag
gtgtatcagacaatccagattgataacatatctaagatgatcccattcttcgacttcacc
gctattgagaaaatatcagttgatgcggttaggcgtaattttcttgccatcaaagtcgat
cacatgaagggtctgtcttctttggcaaacagagtattgaggctgaaggactccgggatc
atctgtctctttnttgctgaatcccttagcaaggcaagaacaatgatctatcccccagca
aagaagacggccaagctcggggatgccttgtctaatttagcggagatagtggagaaggag
cacaagagacttcttgcaaggaagtccattattgaaaaacgcaaagaggagcaagagcgt
ttactcttagaaatggaacgagtggaagagtcgaagaggcgagagcttcaaaagatgaca
gaagatgctgagcaaaagcgcattgctgccgagtatgagcaaaggaggagccagagaatt
ttgaaggaaatagaagaccgagaacttgaagaggcacaagctatgctgcaagaagctgaa
aaacgcagcaagaggaagaagaagcctattctagagggagaaaagatgactaaacaggtg
atcatggaattggcactgaatgagcaactgagggagaggcaagaaagggagaaaaagttg
cagaagtatgccaaaactatggatcatttggaaagagctaagagagaagaagccgcacct
cttattgaagctgcatataaacagcgtttagctgaagaggcagctcttcatgaacgcgag
cagcagcaagaggttgaattgagcaggcaacgccatgctggggacttggaagagaaaaag
agactgggacgcatgttggagaacaagaggattttgcaagaaagagttgttagtagccgg
gaagctgaactcaatagattgaagcaggagagacgagaaaggatcagccagataattcaa
tcaaggaagcaggagagggaagctaagaggaaaatgttattctttttgcgaactgaggag
gagcgtcaaaagaggttactggaagaggaggaagcccgcaaacgtgaagaggcagagaga
cggaagaaagaggaagctgagcgacaagccaagctagatgagattgctgaaaagcagagg
ctgcgaatgatagagcttgaagagaaagaaagacgggaaaaagaagagatcttgcgcagg
cctgctgtactgccaaggccttctgagcctcaagccttggggcgtccaactgaacttgga
ggagctgctcccgttcctgcagcagcagctgctgcacctgctgctgggaaatacgttcct
aggcacttgcgaggtaacgttgatgctgcaggccaggctccacctcctgatactgacagg
tggggcactggaagcaagtcagatgatagaccatcatggcgcgatgaacgaaggcccaca
tcatttggtagtagtggctcgaggaccagttggtcatcttctaggcggtga
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