Solanum lycopersicum (tomato): 101263946
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Entry
101263946 CDS
T02665
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101263946
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101263946
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101263946
NCBI-ProteinID:
XP_004231118
UniProt:
K4AYB8
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Position
1:77993045..77997715
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AA seq
425 aa
AA seq
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MLFRILFIVLLATSLFATSCNGKKKIEKPIKHGHVKKRTQAIIDIQSFGAKGDGISDDTQ
AFIKAWKKTCKTENGVLLIPRHKIYYIGPIKFHGPCKKGLRMMINGELRASKDISDYNED
KRHWLLFQNMENFIVEGVGSIDGNGQIWWKNSCKVDKTIPCNTKTLTVPTAMSFYNCTNL
KVRNLGFKNPQKMHLTITKSELVEVSRLKITAPYDSPNTDGIHVSGTKDIDIHHSYIETG
DDCISIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDVVSNIYVHDATLRGTTNGLRIK
SWQGGRGYAKDILFQNIQMVNVTNPIIIDQFYCDQDKPCKEQKEAVRVSNIMFKNIKGTS
FTQTAIKLKCSKTVPCKGIQMENVNIRHEGGLTVKALCTNVKYTTKGVLFPKCPSEPHPL
TFLRN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagaattctctttatagtattattagccacttcattgtttgcaacttcttgt
aatggaaaaaagaagattgaaaaaccaataaaacatggtcatgtgaaaaagagaacacaa
gcaattattgatatacaatcttttggagccaaaggtgatggaatttcagatgatacacag
gcattcataaaggcttggaagaagacatgcaaaacagaaaatggtgtgcttttaattcca
agacacaaaatatattacattggaccaattaagtttcatggtccttgtaagaaaggactt
agaatgatgataaatggagaactaagagcttcaaaagatatatcagattataatgaagat
aaaagacattggcttttattccaaaatatggaaaattttatagttgaaggtgttggaagt
attgatggcaatggacaaatatggtggaaaaattcttgcaaagttgataaaactattcca
tgtaatacaaaaacactaacagttccaactgctatgtccttttataattgtacaaatttg
aaagtgagaaatttaggttttaaaaatccacaaaaaatgcacttaacaattacaaaaagt
gaacttgttgaagtttcaagattgaaaattacagcaccttatgatagcccaaacactgat
ggaattcatgtttcggggacaaaagatatcgatattcaccattcatatattgaaacaggt
gatgattgtatctcaatagtaaatggttccactaatgttagagcaagatatatacattgt
ggacctggccatggaataagtattggaagcttgggtaaaaataaagaggaggatgttgtt
tcaaatatttatgtacatgatgctacattgaggggaacaactaatggattaagaataaag
tcttggcagggaggacgtggatatgcaaaagatattctttttcaaaatatacagatggtg
aatgtgaccaaccccataatcattgatcaattttattgtgaccaagataaaccatgcaaa
gagcagaaagaagcagtgcgtgtgagtaatataatgttcaaaaatataaagggaacgagt
ttcacacaaactgcaattaaattaaaatgcagcaaaactgttccatgcaaagggatacaa
atggaaaatgtgaatatacgtcacgaaggaggtttaactgtcaaagctttatgtacaaac
gttaaatacacaacaaagggggtgttattcccaaaatgcccttccgagccgcacccgttg
acatttttgcggaattaa
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