KEGG   Solanum lycopersicum (tomato): 101263952
Entry
101263952         CDS       T02665                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101263952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101263952
Spliceosome [BR:sly03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101263952
 Complex B
    101263952
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 101263952
NCBI-ProteinID: XP_010312245
UniProt: A0A3Q7ILY9
LinkDB
Position
10:complement(62624488..62629482)
AA seq 350 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLVLSNMYQRPDMITP
GVDPQGQPLDPRQIQRHFEDFYEDLFEELSKYGEIENLNICDNLADHMVGNVYVQFREED
HAASALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGKSSRRRRSHSRSRSPRGNRNYEEQRPQGGRGFGRRGGGGGGDRYHDRGRRPRSR
SPGRRSGHSRSPGGRRNRSPIREGSEERRAKIEQWNREKEETGSGRNHGGGARREDREGS
AERRAKIEQWNREKEEADSAKYGNFDADNGRNDGGVHYGEQFDDGYPKQQ
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttctatattcggtacagagaaagacagggtgaattgccctttc
tactttaagatcggagcgtgtcggcatggtgaccgctgttccaggcttcacacaaagcct
agcatcagtcccaccttggttctctctaacatgtaccagcgtcctgatatgatcacccct
ggtgttgaccctcaaggccagccccttgaccctcgccagatccagcgtcacttcgaggac
ttctatgaagatttatttgaagagcttagcaagtatggagagattgaaaacctcaacatc
tgtgacaatttagctgaccacatggttggtaatgtgtatgtccagttcagagaggaagat
cacgctgcaagtgcgcttcagaatcttacaggaagattttatgcaggacgcccaatcatt
gttgacttctccccagtgactgattttcgggaagccacgtgtaggcagtatgaggaaaat
gtatgtaaccgaggcggctattgcaacttcatgcatcttaaaaagataagcagggagttg
aggcggcaattatttgggaagagcagtaggcgaaggcgcagtcatagtagaagccgaagt
ccgcgtggtaatcgcaattatgaagagcagcgcccacagggaggtcgtggttttggtaga
agaggaggtggaggaggtggtgatcgctaccatgatagaggtaggaggcctagaagcaga
agtcctggacgaaggagcggacacagcagaagtcctgggggcaggagaaatagaagtcca
attagggaaggaagtgaggagagaagagcaaagattgaacaatggaacagagaaaaggaa
gagacaggatctgggaggaatcatggcggtggggcacgtagggaagacagggaaggcagt
gctgagaggagggcaaagattgagcaatggaacagggagaaagaagaggcagattctgct
aaatatggtaattttgacgctgacaatggcaggaatgatggtggtgttcactatggagaa
cagtttgatgatggttacccgaagcagcagtag

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