Solanum lycopersicum (tomato): 101264035
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Entry
101264035 CDS
T02665
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101264035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101264035
03036 Chromosome and associated proteins [BR:
sly03036
]
101264035
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101264035
Coactivators
SAGA/TFTC/STAGA complex
101264035
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101264035
STAGA complex
101264035
TFTC complex
101264035
SAGA complex
101264035
SLIK complex
101264035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
101264035
NCBI-ProteinID:
XP_004244343
UniProt:
A0A3Q7HFS0
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All DBs
Position
7:69414987..69419390
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AA seq
560 aa
AA seq
DB search
MSTVPEEAIDVISQSIGISNLSPDVLPALAADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDSALTLRNVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDIEFKDVIEAPLPKAPLDTAL
FAHWLAIEGVQPAIPENPPLEALVPPPDNQKAEYKEDGVPVDLKVPVKHVLSRELQLYYD
KITELIMNKSNSPLFKEALASLATDPGLHPLVPYFTYFVADEVARNLNNFDLLFALMRLV
WSLLQNSHLHIEPYLHQSMPSVMTCLVAKRLGNKFADDHWELRDFTAKLIALICRRYGHV
YHSLQPRVTKTLLHAYLDPAKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLRLLEPEM
QFEKQKNEVKRHEAWRVYGALMCAAGLCMYEHFKMLPASLCQSNQTFLKSQLKVLTTLPN
KRKTSMDNMVSQPPTKKLVTDGPTPMLSDSLSADIQGATDGHDTVPAVTDGDLSSSDTVL
AVTDGDLSSSPQDLQNKNVTNVTKPSKREITGGQSQKTPAAPGQALKKDMDAANLLPPLF
DYFGESMLFFVPSPELSFFL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgccggaagaggcaatcgacgtgatatcacaaagcatcggaataagcaat
ttatcaccggatgtcttgccagctctcgccgccgacgtcgagtaccgtattcgggaaatt
atgcaggaggctataaagtgtatgcgccattcgaagagaactactttatctactgatgat
gttgattctgcactcaccttgagaaatgtggagccaatatatggttttgcttcgggagat
cccttacgattcaggagagctgctgggcataaggatttgttctatattgaagagaaggat
atagaattcaaagatgtgattgaagcacctctgccaaaagcaccattagatactgctctt
tttgctcattggttagctatagaaggggtacagcctgctattcccgaaaaccctccactt
gaagcacttgttccacctcctgataaccaaaaggcagagtataaggaggatggagttcct
gttgatcttaaagtacctgttaagcatgtcttatcccgtgagcttcagctttattatgac
aagattacagagcttatcatgaacaaatccaactcccctctcttcaaagaagctttagca
agcttagcaacagaccctgggctccaccccttagttccgtacttcacatattttgttgct
gatgaggttgcacggaatttgaataattttgatctcctttttgctttgatgaggctggtc
tggagccttcttcaaaattctcatttacatattgaaccatatctgcaccagtcgatgccg
tctgtaatgacatgccttgttgcgaaaaggctggggaataaattcgctgacgaccattgg
gagctaagggacttcacagcaaagttgattgctttaatatgcaggcgatatggtcatgtc
tatcacagtctccaaccacgtgtcacgaagactctgctgcatgcttatcttgatccagct
aaggcactgccacagcattatggagcaattcaagggctagcagctcttggacctggtgtg
gttcgcctgcttgtgctgccaaatcttgaagcttatttgcgattgttggagcctgaaatg
cagtttgagaaacaaaaaaatgaagtgaaaagacatgaagcttggcgcgtatatggggcc
ttaatgtgcgctgcgggtctatgcatgtatgagcatttcaagatgcttcctgcatctctg
tgtcaatcaaatcagacattcctgaagagtcaattaaaagtcttgactacattgccgaac
aaacgcaaaacgagcatggacaacatggtctcacagccgccaaccaagaaattagtgaca
gatggtcctacaccaatgctatcagattctttgtcagcagacatacaaggagctaccgat
ggacatgacacagttccggctgttacagatggggatttatcatcaagtgacacagttctg
gctgttacagatggggatttatcatcaagtccacaagatttgcaaaataagaatgtgacc
aatgtgacgaaacccagcaaaagggagattactggcgggcaaagccaaaaaacaccagct
gctcctggtcaggccctgaagaaggatatggatgctgcaaatttgttgccacctctattt
gattattttggtgaaagtatgttattctttgtaccttcccctgaattgtcattctttttg
tga
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