Solanum lycopersicum (tomato): 101264097
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Entry
101264097 CDS
T02665
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101264097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101264097
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101264097
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
Mucin-like
SET_assoc
DUF2129
Motif
Other DBs
NCBI-GeneID:
101264097
NCBI-ProteinID:
XP_004234353
LinkDB
All DBs
Position
3:complement(4489308..4494227)
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AA seq
370 aa
AA seq
DB search
MRPIFCGNFEFETRQPELERLFKRYGKVDRVDMKSGFAFVYMDDERDAKDAIQGLDRIEF
GRKGRRLRVEWSKEERSRKPEGSKKSSSSFRVSKTLFVINFDPYNTRTRDLERHFDPYGK
ILNIRIRRNFGFIQFETQEDATRALDATNMSKLMDRVITVEYAIRDDDDRKNGYGPGKTY
NQSPRRGYDRGRSRSPRGRDRLSPDYGRGRDRPSPDYGRGRDRPSPDYGRGRDRPISDFD
RGRDRPNSDFGRGRDQLSPDYGRGPSRSPKHREGNSEYGRGHSPAVGKERNPGHGNVRSP
SPRRERTGPGNGLMSSPLNISPGYGDGPSPSAQRERRDKYSPDGHNRGSSPGPKPEPVGS
PVRDGRGSSE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattttctgtggtaactttgagtttgaaaccagacagcctgagctggaaagg
cttttcaaaagatacgggaaggttgatagggtggatatgaagtctggttttgcttttgtt
tatatggatgatgaaagagatgcaaaggatgctattcaggggcttgaccgaatagaattt
ggcagaaagggacggaggcttcgtgttgagtggtctaaggaagaacggagcaggaagcct
gagggttctaaaaaatcttcatcaagcttcagagtttccaagaccttgtttgtcataaat
tttgatccatataatactaggacaagggatctggaaaggcactttgatccatatggaaaa
atactcaatataaggatccgaagaaattttggatttattcagtttgagacacaggaggat
gccactagagccctggatgctacaaatatgagtaagctgatggaccgagttatcactgtg
gagtatgcaatcagagatgatgatgataggaaaaatggatatggtcctggtaaaacctat
aatcaatcacccagaagaggttatgaccgtggtcgatctcgtagtccacgtggaagagat
aggctgagtccagactatggtcgtggccgagatcggcctagtccagactatggtcgtggt
cgagatcggccaagtccagactatggtcgtggtcgagataggcctatttctgacttcgat
cgcggtagagatcggccaaattctgactttggtcgtggtagagatcagctaagtcctgac
tatggtcgtggccctagtcgaagtcctaagcacagggaagggaattctgagtatggccgt
ggccatagtccagctgtaggaaaggagagaaatcctggtcatgggaatgttcgtagccct
agccctcgtagggaaagaacaggtccaggaaatggtcttatgagcagtccactgaacata
agtcctggttatggtgatggacccagtcctagtgctcagagggagaggagagataaatat
agcccggatggtcataatcgtggcagcagcccaggtcctaaacctgaaccagtaggaagt
cctgtacgtgatggtaggggaagttcagagtga
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