Solanum lycopersicum (tomato): 101264126
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Entry
101264126 CDS
T02665
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101264126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101264126
04121 Ubiquitin system [BR:
sly04121
]
101264126
03036 Chromosome and associated proteins [BR:
sly03036
]
101264126
03400 DNA repair and recombination proteins [BR:
sly03400
]
101264126
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101264126
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101264126
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101264126
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101264126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_2
zf-C3HC4_4
PHD_NSD
zf-RING_6
Prok-RING_4
zf-C3HC4_3
zf-RING_10
RTT107_BRCT_5
zf-RING_2
zf-RING_5
cwf18
Motif
Other DBs
NCBI-GeneID:
101264126
NCBI-ProteinID:
XP_004240481
UniProt:
A0A3Q7GSA2
LinkDB
All DBs
Position
6:complement(2112381..2119764)
Genome browser
AA seq
702 aa
AA seq
DB search
MAAEAQSIARFLNPLAFHIQKLGLELKCPLCLNLLTKPMLLPCDHIFCNFCVPSSTQVQC
ECPLCKHQYVDQEIRAVPHMESMISIFRSLDATCNAKVFQFQSPDAGRPLEQSPVSVNAD
KSRNEQTVKATIRNNDPSKEIQRHNEHGMPWNVVNHLSVLPSSDRKKDSKNDGYNAEEID
LIQFQQQSPGSAHSSDSNKDIVKETSELRVMKTNAAKRLVEDSSDVVPFLKKEDSFEGLM
HHTAMHENVFHERDVKRQKKLSYGLPEMALQSHDHNQQRESCSRIIANSDCNLTCKLSES
SFVAHPQEVSDQHLLEGSACAFCLKSKITEGTGPMLHYANGREVVGDATSLSKAIPVHMK
CIDWAPQVYYDGEIIKNLEAELARASKLKCSGCGLKGAALGCLVKSCRRSYHMPCAFEMQ
NCRWDTDNFVMLCPSHKSVKFPSEKSKSRKRANIEARTEPAPITSERLNFWATSSDGPKE
WVLCGSALSSEEKYMLVKFANVCGATVCKSWNPSVTHVIAATDEKGACTRTLKVLMAILG
GKWILTIDWIKACVQENYPVNEEAYELSLDNHGCFGGPKIGRLRASSNAPKLFDGLKFYL
SGDYVPAYRTDLLDLVENAGGSIIHTKEQLISQTVATQTASSACLVVYSSDPPRGCEFGE
ERNILLQRQANAEELAKPLGCQVIQHTWILESIATCKLVPFC
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggctcaaagcattgctcggtttctcaacccattggcttttcatattcag
aaattgggtcttgagctcaaatgccctctttgcttaaacttgctgactaaacctatgttg
cttccctgtgaccatattttttgcaacttttgtgttccgagctcgacccaagttcaatgt
gaatgccctttatgcaaacatcaatatgttgatcaagaaattagagcagtgcctcatatg
gagagtatgatatccatatttagaagcttagatgctacttgcaatgctaaagtctttcaa
ttccaatctcccgatgctggaagaccactagagcagtcacccgtttctgttaatgctgac
aaatcaagaaatgagcaaactgtcaaagccacaataagaaacaatgatccgagcaaggag
attcaaaggcacaacgaacatggaatgccatggaatgttgtgaatcatttgagtgtcttg
ccttcttctgacaggaagaaagactcgaaaaatgatgggtataacgcagaggaaatagat
ttgattcaatttcaacagcagtcaccaggcagtgctcattcatcagacagcaacaaagat
attgttaaagagaccagtgaactgagagttatgaaaaccaatgctgcaaagaggcttgta
gaagatagctcggatgtggttccatttctgaaaaaagaagatagctttgaaggtttaatg
caccacacagctatgcatgaaaatgtgtttcatgaaagggatgtgaagagacaaaagaaa
ctaagctatggattgccagagatggccttgcagagtcatgatcataatcaacaaagagag
tcttgttcaagaataattgccaactctgactgcaacttgacatgcaaattgagtgaatct
tcttttgttgctcatccacaagaagtttcagatcaacatcttctggaaggcagtgcttgt
gctttctgcctcaaatctaagataacagagggaactggaccaatgctgcactatgcaaat
ggcagggaggtggtgggagatgccacttcactttcaaaagccatacctgtgcatatgaaa
tgtattgactgggcgcctcaagtatattatgatggagagatcataaaaaatttggaggct
gaattggcaagagcttcaaaactcaagtgtagtggttgtggcctaaagggtgctgctctt
ggctgccttgtgaagtcttgtcggaggagttaccatatgccctgtgcatttgaaatgcag
aactgccgttgggatactgacaacttcgtcatgctgtgtccgagtcacaaatcagttaaa
tttcctagtgaaaagtcaaagtctaggaagcgtgccaatattgaagcacgtacagaacct
gctcccataacatccgagcgattgaatttttgggcaacatcgtcagatggaccaaaagaa
tgggttctatgcggatctgctctatcctcagaagagaagtatatgttggtcaagtttgct
aatgtgtgtggcgcaactgtgtgcaagtcttggaacccaagtgtcactcatgtcattgca
gcaacagatgaaaagggtgcatgcaccagaacactgaaagttctcatggcaattttgggt
ggaaaatggatcctaacaattgattggataaaagcctgtgttcaagaaaattatcctgtc
aatgaagaggcttatgaattaagcctggacaatcatggctgttttggaggtcccaaaatt
ggtagattaagggcttcatccaatgcacctaagctatttgatggtttgaagttttatctg
agtggagattatgtcccagcttacagaactgacctattagatttagttgaaaatgctgga
ggttccataatccacactaaggaacagttgatttcccagactgttgctacacaaacagct
agctcagcttgtctagttgtttatagcagtgatcctccacgtggttgtgaattcggggaa
gaaagaaacattttgcttcaacgacaagcaaatgctgaggaactggccaagccacttggt
tgtcaggtcattcagcatacatggattctagagtctattgctacatgtaaattagtgcct
ttctgctga
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