KEGG   Solanum lycopersicum (tomato): 101264221
Entry
101264221         CDS       T02665                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03020  RNA polymerase
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101264221
  09124 Replication and repair
   03420 Nucleotide excision repair
    101264221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101264221
   03400 DNA repair and recombination proteins [BR:sly03400]
    101264221
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101264221
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101264221
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_4 Zn_ribbon_RPAB4 Zn_ribbon_recom
Other DBs
NCBI-GeneID: 101264221
NCBI-ProteinID: XP_004239877
UniProt: A0A3Q7GN86
LinkDB
Position
5:complement(66775062..66779145)
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ
DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattttgccgagaatgtaacaacattttgtatccaaaggaagataag
gagcagaagatcctcctttatgcttgccgtaattgcgaccatcaggagcctgctgaaaac
aactgtgtgtacagaaatgagatacaccattctgctgcagaacgcacacaagtattgcag
gatgtagcagcagatccaactttgcctcgtacaaaatctgttcgatgttctcaatgtggt
catggagaagcagttttcttccaggcaactgcaaggggagaagaaggtatgacgctcttc
tttgtttgctgcaacccaaactgtggtcacaggtggagggattga

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