Solanum lycopersicum (tomato): 101264306
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Entry
101264306 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101264306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101264306
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101264306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
101264306
NCBI-ProteinID:
XP_004235752
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Position
3:64781457..64795382
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AA seq
731 aa
AA seq
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MPRKVNYGVKYEEDFDDYEDYGYDYDDGYDCAEEYGVPPETRLKQESVKSGIWRCPICTF
DNEDTMNVCDICGVFRNPLVKKCVSSKENADGSRAVGGICKDSGASVMAESLFPSLLLQK
AKNVINFEAQNYRFKTEDCFYYKPGNICGQFHDLHRAFCSQSHCKIDIVPFKFDSPSPDD
LVLSGIAPSKLRPKADTDRILQLDISSNIKELSTEVKKELAAEGHPSSSTSLAKVKNDDL
KDSGPASKTRGNNGLASNLNDISVSSKPQSVDTGKSDSAASSSKNKPEKIVQPPQTEDNF
NQLNLAIVGHVDSGKSTLSGRLLHLLGRISHKEMHKYEKEAKQQGKGSFAYAWALDESAE
ERERGITMTVGVAYFNTKCYRVVLLDSPGHRDFVPNMISGATQADAAVLVIDASVGAFEA
GIDATGGQTREHAQLIKSFGVDQIIIAVNKMDAVGYSQERFDAIKKQLGTFLRACKFKDS
SVTWIPVSAMENQNLVTGPSESRFLSWFRGPCLLDAIDSLQPPQRDYSKPFLLPICDVVR
AQSQGQVSICGKLERGALQTGNKVLVMPFRDVATVRSLERDSQVCNAAKAGDSVTINLQG
IDANHVMAGGVLCHPEFPVPVANHLELKVLILENGIPIVIGSQLEFLVHHAKEAARVVRI
LSLLDPKTGKETRKSPRCLLAKQNAMIEVVLQGMVCIDEHANCKALGRVSLRSSGRTVAL
GLVTRVIGKQE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtgaattatggagttaagtatgaggaagattttgatgattatgaagat
tacggttatgactatgatgatgggtatgattgtgcagaggaatatggtgtgccgccagaa
acaaggttaaaacaagagtcggttaagtctgggatttggcgttgtcccatttgcacattt
gataatgaagatactatgaatgtatgtgatatatgtggagtctttcgtaatccattggtc
aaaaaatgtgtcagcagtaaagaaaatgcagatggttcccgtgcagttggtggcatatgt
aaagattctggagcatctgtaatggccgagtctctatttccatcactgctgcttcagaaa
gcaaaaaatgttataaactttgaagcacagaattaccgttttaagaccgaagattgcttt
tactacaagcctggaaatatctgtggacagtttcatgatttacacagagctttttgctct
caaagccactgcaagattgatatagtacctttcaagtttgactccccatctccagacgat
ttagtactgagtggaatagcaccatccaaattacgtcccaaagctgatactgacaggatc
ttacagttagatatctcatcaaatatcaaggaactgagtacagaagtaaaaaaggaattg
gctgcggaagggcatccaagctcttcaacatcattagcaaaagttaagaacgatgatttg
aaggatagtggtcctgcttcgaaaactaggggaaataatggcctagcaagcaatttgaac
gatatatctgtatcatcaaagcctcaaagtgtggatacaggaaagagtgacagtgcagca
tcaagctcaaagaataagcctgagaaaattgtgcagcctcctcaaacagaagacaacttc
aaccagctaaatcttgcaattgttggccatgtggattctggaaagtcaacactatcagga
aggttgctgcacctattggggcggatatcccataaagaaatgcacaaatatgaaaaagag
gctaagcagcaaggaaaaggttcatttgcttatgcctgggcattggatgagagtgctgaa
gaaagagagaggggaataactatgacagtgggtgttgcctactttaacacaaaatgttac
cgtgttgttctgcttgattccccaggccacagggactttgtcccaaatatgatatcaggg
gctacacaagcagatgcagcagttcttgtaattgatgcttcagttggtgcgtttgaagca
ggtattgatgctactggaggtcagacgagggagcatgcacaacttatcaaaagctttggg
gtggatcagattataattgcagttaacaaaatggatgcagtgggatactcccaagaacga
tttgatgcaattaagaaacaattgggcacatttctccgtgcttgtaagtttaaagattct
tcagtaacatggattcccgtaagtgccatggaaaaccaaaatttggtgacaggtccatca
gaatcacggttcttgtcctggtttcgaggtccttgcctattggatgcaatagactctctc
caacctcctcaaagagactactcgaagccatttttattgccaatatgtgatgttgttaga
gcacagtctcaagggcaagtgtcaatatgcggtaagttggagaggggagctcttcaaact
ggaaataaggttttagtcatgccattcagagatgtggcaacagtgcgttctttggaacgt
gattctcaggtttgtaacgccgcaaaagctggagacagtgtcactatcaatctacagggt
attgatgccaatcacgtgatggcggggggtgtcttgtgccaccctgaattcccagttcca
gttgcaaatcatttggaactgaaggtcctcatcttggagaatggcattccaattgtaatt
ggctctcagttagaatttcttgtacaccacgctaaggaggctgcaagagttgtgaggatt
ttgtccttgcttgatccaaagactggaaaggagaccagaaaatcacctcgatgtcttctg
gcaaagcagaatgctatgattgaggtggttttgcaaggaatggtttgcattgacgagcat
gctaattgtaaagctcttggaagggtgtccctccgatcatcaggaagaactgttgccctt
ggtctggtgacccgagttatagggaagcaggagtaa
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