Solanum lycopersicum (tomato): 101264474
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Entry
101264474 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K18735
protein SMG9
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101264474
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101264474
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_16
AAA_18
RsgA_GTPase
MeaB
AAA_30
FeoB_N
Motif
Other DBs
NCBI-GeneID:
101264474
NCBI-ProteinID:
XP_019068112
UniProt:
A0A3Q7FE87
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Position
2:71192995..71198806
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AA seq
404 aa
AA seq
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MAGSGGNLSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPDDDPAAHRPRLPSVGSLNLL
SDTWDFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDASLPGTLPPFAIETE
ETRAMAKHCTVGIEPRVSSERIILLDTQPVFSPSVLAEMIRPDGSSTIPIISGESLSAEL
AHELLSIQLGVLLASICHMILVVSDGVHDASMWQLMSTVDLLKHGIPDPSSLTFSHRQSS
EKENRDRILDSGGEYMADPVFVHTKLCTEDLAPCNLVQLKKALTQFFCSSSFVRSENHNT
AKESQVSAVTSNVQSAGRESEFLKLFLIPSRDKDDSLKPQYESHISALWNLRDQVLSKRG
PSFSRTVSERDWVKNSAKIWEIIRNSSIIVDYCRTLQSSGMFRR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagtggtggaaatcttagttccaatcagtcatctgtgtctcatcaagctccc
aaaatcctattagccaaacctggacttgtttccgccggtaagttcaaccgtggtggacct
gacgatgatccagcagctcaccgcccacgtcttccctctgttggatctcttaatcttctc
tctgacacctgggatttccacacggatcgttttctcccatttctaacggataatacggac
tttacagtagtgggtgtgattggtcctcccggggttgggaaatcgacgataatgaacgaa
atttatggttttgatgctagcttgcctggaacgcttcctccttttgccatagaaacagaa
gaaacaagggctatggcgaaacattgcacggttggcattgaaccacgggtttcatctgaa
cggattatactgcttgatacacagcctgtttttagcccctcggttttggctgaaatgata
agaccagatggctcatccaccataccgataataagcggtgaatctttatcagctgagcta
gctcatgaactcttgagcatccagcttggtgttcttcttgcatccatttgtcacatgatc
ttggtggtatcagatggagtccatgatgctagcatgtggcaactcatgtcaacggttgat
ttgctaaagcatgggatacctgatccatcatctttaaccttttctcatcgtcaaagctct
gagaaagaaaacagagacagaattctagatagtggaggagagtacatggctgatccagta
tttgtgcatacaaagctatgcactgaagatctagcaccatgtaatcttgttcaactgaag
aaggcactcacacaattcttttgctcgtcatcctttgtgagatcagaaaaccacaacact
gccaaagagagtcaagtttctgctgttacttccaacgttcaaagtgctggtcgagaatct
gaatttttgaaattatttcttattccatccagagataaggatgattccttgaagccacag
tatgaaagccacatttcagcattatggaatttgcgggatcaggttttgtcaaagagaggt
ccgtctttctcaaggactgtgtctgagcgtgattgggtgaaaaattctgccaagatatgg
gaaattattaggaattcttccattattgtggactattgcagaactcttcaaagttcaggc
atgtttaggaggtaa
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