Solanum lycopersicum (tomato): 101264507
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Entry
101264507 CDS
T02665
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101264507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101264507
03036 Chromosome and associated proteins [BR:
sly03036
]
101264507
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101264507
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101264507
PBAF complex
101264507
GBAF(ncBAF) complex
101264507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101264507
NCBI-ProteinID:
XP_010319062
UniProt:
A0A3Q7FPC3
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All DBs
Position
3:58644485..58648194
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AA seq
526 aa
AA seq
DB search
MNNNNPVKNVSLGTSVPIQIPQSMPINHNQPAVRHFSQSPAQRGSHFPGHFQLSESRSHA
PFQGQAQAFSHFITSGVNTNAGVSSPAASTPNTASGGARKVLHRPPSRTGGSSNHGQATA
SPLKTMELTPAVRRKKQKVSDRFIPDKVAASLPESALYSQLLEFEGRVDALLSRKKIDML
ESLKSPPRFQRTLRIYVFNTFANQTPAKPDSDSAEPASWSLKIIGRILGGGSGSQASERE
QKLGVACPKFSSFFKKVTVYLDQSLYPENHVILWDSSRSPALHEGFEIKRKGDKELTAII
RLEMNYMPEKFKLSPALQEVLGIEVETRAKVLAALWYYIKTKKLQICHDTSSFTCDPPLR
KIFGEEKLKFSLVSQKIHPHLTAPQPIHLEHRIKLSGSSPAGNTCYDVLVDVPFTLQKEF
STFLSDLDKNKEIDAYDEAISTALKQIHEHQRRRAFFLGFSQSPTDFVNALVASQARDLK
LVSDDSTRDSEMERRSEFYNQSWTEDAVVRYLNRNHASGADHSARK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaataatccagttaagaatgttagtttaggaacctcagttccaattcaaatt
cctcaatctatgccgataaaccataatcaaccagctgttcgtcacttctcccagtcacca
gcacaacggggttcacatttccctggccattttcagttatctgaatcacgatctcatgcc
ccatttcaaggtcaagctcaggcctttagccatttcatcacttcaggggttaataccaat
gctggtgtttcatcccctgctgcttctacacccaatacagcttctgggggtgctagaaaa
gtgctccatagaccaccttctcggaccggtggttcatctaaccatggtcaagcaactgct
tctcctttaaagacaatggaattaacccctgctgtgcgtaggaaaaagcaaaaagtttct
gacaggtttataccggataaggtggctgcgagtttgcccgagtcagcactttactctcag
ttgcttgaattcgagggtcgtgtagatgctcttctttctagaaagaagattgacatgttg
gaatcccttaagagtcctccgcgtttccagagaactctcagaatttatgtattcaatact
tttgcgaatcagacaccagctaaaccggacagcgattcggctgagccagcttcatggtct
cttaagataatcggaaggatcttggggggtgggtcgggttctcaagcatctgaaagggag
cagaaattgggtgttgcttgccccaagttttcatctttcttcaagaaagttactgtttac
ttggatcaaagtctatatcctgaaaaccatgtaattttgtgggatagttctcgatcacca
gctcttcacgagggttttgagattaagaggaaaggggataaggagcttactgcaatcatc
agactggagatgaattatatgcctgagaaatttaaactatcgccggcattgcaagaagtt
cttggcattgaggttgagacacgagctaaagttttagctgctctttggtactacataaaa
actaagaagctacagatatgccatgacacctcctcgttcacttgtgatcctcctctaagg
aagatttttggagaagaaaagttgaaattttccctggtttcccaaaagattcatccgcat
ctgactgcccctcaacctattcacctggagcacaggattaagctatctggaagtagccca
gctgggaacacttgttatgatgtactggttgatgttcccttcacattgcagaaggaattc
tccacattcttatctgatttagataagaacaaggagattgatgcatacgatgaagctatt
tccaccgctctaaagcaaatccatgaacatcagagaaggcgagctttcttcctgggattt
agtcagtcacctaccgattttgttaatgcattagttgcatctcaagccagggatcttaag
cttgtttctgatgattcgacccgtgattcagaaatggagaggcgttctgaattctacaat
cagtcttggactgaagacgctgttgtgcgctacttgaatcgcaatcatgcttctggtgct
gaccattctgctagaaaatag
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