Solanum lycopersicum (tomato): 101264596
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Entry
101264596 CDS
T02665
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101264596
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101264596
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
101264596
NCBI-ProteinID:
XP_004251989
UniProt:
A0A3Q7J6V2
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Position
12:complement(9740585..9744571)
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AA seq
395 aa
AA seq
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MTSKLITPFIIFLFSSILNLFIKSSNASTTYNVLSFGAKPNGQIDATQSFLNAWRAACTS
VEPSTIYVPKGRYLIKEATFRGPCKSKITVKIDGTLVAPLDYWGIGNSGYWILFIEVNGI
SVIGGSIDAKGDGFWACRKSGNNNCPVGARSITFNWANDVVVSGLLSINSQVTHLVINSC
NNVMVKNVKVIAPDQSPNTDGIHVQSSTNVTIIGCRIKTGDDCISIGPGTRNLWMEKILC
GPGHGVSIGSLGREYEEDGVQNVTLSYSIFTGSDNGLRIKSWARPSTSFVKNINYRNIVM
KYVDNPIIIDQNYCPNNKDCPQQTSGVKINDVIYKNIEGTSTTEVAMNFDCSPSNPCQGI
QIQDIKLTYMNKKAKSFCNNIQGTKKGVIWPATCI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactagtaagcttataacacctttcattattttcctcttttcttctatacttaattta
ttcataaaatcatcaaatgcatcaacaacctacaatgtattaagctttggtgcaaaacca
aatggccaaattgatgcaactcaatcatttctaaatgcatggagagctgcttgtacctca
gttgaaccatcgacgatttacgttccgaagggacgttatttaataaaagaagcaacattt
agaggtccatgtaaaagtaaaattacagtaaagattgatggaactcttgttgcaccattg
gattattggggaattggtaattctggttattggattttgtttattgaggttaatgggatt
tcagttataggtgggagtattgatgctaaaggagatggtttttgggcttgtagaaagtca
ggaaataataattgtccagttggagctaggtctataaccttcaattgggctaatgatgtt
gtggtaagtggtttactatcaatcaacagccaggtaacacaccttgtgatcaatagttgc
aacaatgtaatggttaaaaatgtaaaagtaatagccccagatcaaagcccaaacacagat
ggaattcatgttcaatcatcaacaaatgttactatcattggttgtagaatcaaaactgga
gatgattgtatatctattggtcctggtacaagaaatctttggatggagaaaattttatgt
ggacctggacatggtgttagcattggaagtctaggaagggaatatgaagaagatggggtg
caaaatgtaacattatcttattcaatattcacaggatctgataatggattaagaattaaa
tcttgggcaagacctagcacaagttttgtcaaaaatattaattatcgtaacatagttatg
aagtacgttgataatccaatcataattgatcagaattattgcccaaacaacaaagattgt
ccacaacagacttctggtgtgaagattaatgatgtaatatacaaaaatatagaagggaca
tcaacaacagaagttgctatgaactttgactgcagcccaagcaatccatgccaaggaatc
caaatacaagacataaagctcacttatatgaacaaaaaagcaaaatcattttgcaacaac
attcaaggaactaaaaaaggagttatttggcctgctacttgtatatga
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