Solanum lycopersicum (tomato): 101264608
Help
Entry
101264608 CDS
T02665
Symbol
ABCG52
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101264608 (ABCG52)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sly02000
]
101264608 (ABCG52)
Transporters [BR:
sly02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
101264608 (ABCG52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
AAA_21
ABC2_membrane_7
ABC_trans_N
AAA_16
AAA
AAA_25
AAA_29
AAA_22
AAA_23
AAA_33
RsgA_GTPase
AAA_18
AAA_30
nSTAND3
AAA_28
NACHT
Zeta_toxin
RuvB_N
AAA_17
NTPase_1
AAA_5
cobW
DnaB_C
AAA_11
DO-GTPase1
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
101264608
NCBI-ProteinID:
XP_004253003
LinkDB
All DBs
Position
12:complement(68035666..68043796)
Genome browser
AA seq
1425 aa
AA seq
DB search
MEPIDFGNLRGSSLRGSVKGSSRGSFRSDSNSIFRNNNIFNRSSRDEDDEEALKWAALEK
LPTFDRLRKGILFGANEIDIHDLGNQQSKDLVDRLVKVADEDNEKFLLKLRDRIDRVGID
LPTIEVRYEHLKIEADAYVGSSALPTFINFVTNFIEPLLYSLHIVPNRKRKLTILDDVSG
IIKPCRLTLLLGPPGSGKTTLLLALAGKLDTELKASGKVTYNGHEMNEFVPQRTAAYISQ
HDLHIGEMTVRETLQFSARCQGVGSRYEMLAELSRREKTANIKPDPDIDVFMKAAATEGQ
EANVVTDYVLKILGLDICADTMVGDEMVRGISGGQKKRVTTGEMLVGPSKALFMDEISTG
LDSSTTYSIVNSLRQTVQILKGTAVISLLQPAPETYNLFDDIILLSDSVIVYQGPREDVI
GFFESMGFKCPERKGVADFLQEVTSKKDQQQYWVRRDEPYRFITSKEFSEAYQAFHVGRK
LGNDLAVSFDKRKSHPAALTTEKYGIGKKQLFEVCKEREYLLMKRNSFVYIFKFCQLLIM
ALISMTIFFRTEMKHDTIDDGGIYSGALFFVIIMNMFNGMSELGMIIYKLPVFFKQRDLL
FFPAWAYAIPSWILKIPVTFVETALWVFLTYYVMGFDPHPSRLFKQFLLLIIVSQMASGL
FRFIGAVGRSLGVASIFGSFALLLQFALGGFVLSRDDVKSWWIWGYWTSPMMYSVNAILV
NEFDGKRWKHIPPNGTEPLGAAVVRGRGFFPDASWYWIGFGALVGFTIVFNICYTIALTY
LKPFGKPQAMIPEDSEDAQTTSAETEDSNSESQNKKKGMVLPFEPHSITFDDVMYSVGMP
QEMKDQGATEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIK
ISGYPKKQDTFARISGYCEQNDIHSPYVTVYESLVYSAWLRLPHNVDTKTRKMFVEQVMD
LVELGPLRSALVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR
TVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLIKYFESMP
GVSKIKDGYNPATWMLEVTASAQEILFGVDFTDLYKKSDLYTRNKALISELSVPRPGTKD
LHFDTKYSQPFWTQCIACLWKQHWSYWRNPTYTAVRFLFTTIIALVFGTMFWDIGGKVSK
SQDLFNAMGCLYATVLFLGTQNSSSVQPVVAVERTVFYRERAAGMYSALPYAFGQISIEI
PYVFMQSVFCGAIMYAMIGFEWTVAKFFWYLFFLFFTLLYFTFYGMMTVAVTPNVSVAQI
VGSFFYGVWNLFSGFIVPRTRIPIWWRWYYWCCPVAWTLYGLVASQFGDLQNKLTDEETV
EQFLRRYFGFKHDFLPIVAVAIVGYTVLFGFTFAFAIKAFNFQTR
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatagattttggtaatttgagaggtagtagtttaagaggaagtgtaaaagga
agttctagaggaagttttagatcagatagtaattcaatatttagaaataataatatattt
aatcgttcatcaagagatgaagatgatgaagaagcacttaaatgggctgcacttgaaaag
ttaccaacttttgatcgtttaagaaaaggaattttatttggagctaatgaaattgatata
catgatcttggtaatcaacaaagtaaagatttggttgataggcttgttaaagttgctgat
gaagataatgagaagtttttgttgaaactcagagatagaattgatagagttgggattgat
ttgccaacaattgaagtaagatatgaacatctaaaaattgaggcagatgcatatgtagga
agcagtgctttgcctacatttatcaactttgtgactaactttatcgagccattgctgtat
tctctccatatcgtaccaaatcgaaagaggaaactcactattcttgatgacgtgagcggt
atcatcaagccttgcagattgactttacttttaggtcctcctggttctggcaaaactact
ctcttattagctttggctggaaaacttgacactgaacttaaagctagtgggaaggtgacg
tataatggacatgaaatgaatgagtttgtgccgcaaagaactgctgcttatattagtcag
cacgatttacacatcggagaaatgactgtgagagaaactttgcaattctctgctagatgc
cagggagttggctctcgttatgaaatgttggctgaactgtcaagaagagagaaaacagca
aatatcaaaccagatcctgatattgatgtttttatgaaggcagcagcaacagagggacaa
gaagctaatgttgtgactgattatgttcttaagattttgggacttgacatttgtgctgat
actatggtgggagatgaaatggtaaggggtatttcaggagggcaaaagaagcgtgtgacg
acaggtgaaatgcttgttggaccgtcaaaggcacttttcatggatgaaatctctactgga
ttggatagttcgaccacttattccatcgtgaactctctaaggcaaactgttcaaatcttg
aagggaactgctgtgatatctctcttgcagccagcgcccgagacatacaatttgtttgat
gacattattctgttatcagatagtgtaattgtctatcagggacctcgagaagatgttatt
ggcttctttgaatccatgggtttcaaatgccctgaaagaaaaggcgtagctgactttttg
caagaagtgacatcgaagaaggatcaacaacaatattgggtgaggagggatgagccttac
aggtttatcacatcgaaagaattttccgaggcatatcaagcatttcatgtagggaggaaa
ctcgggaacgatcttgcagtctcatttgacaagagaaaaagccatcctgctgctttgaca
actgaaaagtatggtatagggaagaaacagctcttcgaagtctgcaaggaaagagaatac
ttgctaatgaagaggaactcgttcgtttacattttcaagttctgtcagcttttgattatg
gcactcatctcgatgaccatctttttccgaactgagatgaaacatgatactatagatgat
ggaggaatatattctggtgctctctttttcgtgatcattatgaatatgtttaacggaatg
tctgagctcgggatgataatctataaacttccagtcttcttcaagcaaagggaccttctc
tttttccctgcatgggcttatgcaattccctcatggatactcaaaatccctgtaacattt
gttgaaactgctctctgggtgtttctcacttactacgtcatgggatttgatccgcacccc
tcaaggctgttcaaacagttcttactactcataatagtaagtcagatggcctcagggttg
tttcgattcattggggctgttggcaggagcttaggagttgctagtatatttggatcattt
gctctgcttttacaatttgcattgggaggcttcgttctttcacgagatgatgtgaagagc
tggtggatatggggttactggacttcacctatgatgtattccgtgaacgcaattcttgtg
aacgaatttgacgggaaaaggtggaaacatattccaccaaatggaactgagcctcttgga
gctgctgttgtaagaggtcgaggcttcttcccagatgcatcgtggtactggataggcttt
ggcgcacttgttggattcacaatcgtgtttaacatctgctacaccattgcactcacttac
ctaaaaccgtttggtaagccacaagctatgataccagaagacagtgaagatgcacaaaca
actagcgcggagacagaagactccaatagcgagagtcagaataagaaaaaaggaatggtt
cttccatttgaaccgcattccatcaccttcgatgatgtaatgtactctgtcggcatgcct
caggaaatgaaagatcaaggtgctactgaagatagattggtacttcttaagggcgtaagt
ggagcattcaggcccggtgttttgacagctttgatgggagtaagtggggctggaaaaaca
acattgatggatgtattggctggaagaaagacaggaggatatatcgagggtgacatcaag
atttcgggctatcctaagaagcaagacacatttgcacgtatatctggatactgtgagcag
aatgacatccattcaccttatgttacagtttatgagtcattagtatactccgcttggctg
cgtttacctcataatgttgatacaaagacccgaaagatgtttgttgagcaagtcatggat
cttgtggagcttggaccattaagatcagccttagttggtttgccagggatcaacggtctc
tcaactgaacaacgcaaaaggttgaccatagcagtggagctagtggctaacccctctatc
attttcatggatgaaccaacctccgggctggatgcaagggctgctgcaattgttatgaga
actgttaggaacactgtcgacacaggaagaaccgttgtttgtaccatccatcaacctagt
atcgacatttttgaagcctttgatgagctctttcttatgaaaagaggaggacaagagata
tacgttggtccattgggtcgccattcttgccatttaatcaaatactttgagtccatgcca
ggggtaagtaaaataaaagatggctacaatccagcaacgtggatgttagaagtcacagcc
tcggctcaggaaatactgttcggggttgattttactgatttatacaagaaatcagacctt
tacacaaggaacaaagcattgattagtgaactgagcgtacctcgccctggtacaaaagat
ctgcattttgacactaaatactcacagccattttggacccaatgtatagcttgcctttgg
aaacaacactggtcatactggcgtaatcctacttatacggcagtcagatttctgtttaca
accatcattgccttggtcttcgggacaatgttctgggatattggtggtaaagtgagtaag
agtcaagatctatttaacgcaatgggatgcttgtatgctactgttctgttcctcggtaca
caaaattcatcatcagtgcagcctgttgtagccgttgaacgtacagtattctatagagaa
agagctgctggaatgtattctgcattaccttatgcctttggacagatttccattgaaatc
ccttatgtctttatgcaatctgttttctgtggtgcaatcatgtatgcaatgatcggtttt
gaatggacggtagcaaagttcttttggtacctgttcttcctgtttttcaccctcttgtac
ttcactttctacggtatgatgactgttgctgttaccccaaatgtaagtgttgctcaaatt
gtcggctccttcttctacggagtatggaatcttttctcaggattcatcgttccacgaact
cgtattcccatatggtggagatggtactactggtgttgtcctgttgcctggaccttatat
ggtttagttgcatcacaatttggtgatcttcagaacaaacttactgatgaagaaacagta
gaacaattcttgagacgttacttcggcttcaaacatgatttccttccaatagttgcagtc
gcgattgttggatacactgttctttttggcttcacatttgctttcgctattaaggcattc
aacttccaaacgagataa
DBGET
integrated database retrieval system
