Solanum lycopersicum (tomato): 101264839
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Entry
101264839 CDS
T02665
Symbol
AGO6
Name
(RefSeq) Argonaute 6
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101264839 (AGO6)
03036 Chromosome and associated proteins [BR:
sly03036
]
101264839 (AGO6)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101264839 (AGO6)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101264839 (AGO6)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101264839 (AGO6)
microRNA pathway
RISC loading complex
101264839 (AGO6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101264839
NCBI-ProteinID:
NP_001266273
UniProt:
K4CF53
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All DBs
Position
7:complement(62076884..62089276)
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AA seq
903 aa
AA seq
DB search
MENSEGRESCFSPVEEPPPVIMSNAEPERVDQPKRTIMMRAGDGTSGREISLLANHLKVS
IKCPDEIFYHYSVSITSDEKRAVNSKVIRRKIVDKLHETYSSEFAGKKFAYDGEKNLYTV
GPLPRNRLEFTVVVEESSARQASESPSDNGSLNHSIKRFKHSLHSKAFLVEIDYAAKIPL
RSVDLALQGADPENVQDALRVLDIILRQKAANRGCLLVRQSFFHDDSRNFTDVGGGVMSC
RGLHSSFRPTDGGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNMR
VKAKHDNREFKIIGLTDKPCNQQLFSMKVKNGGSPDDGGETLDITVYQYFTKHRNIELSS
SVYMPCLDVGKPKRPNYLPLELCYLVSLQRYTKALSSVQRASLVEKSRQKPRERIKVITD
AVRDYSYDDDPLLVACGISIEKQLIQMNGRVLEAPKLKVGNGEEVTPCDGRWNFKNKHLF
NPARIERWAVVNFSANCDTSHLSRELISCGRSKGIHFERPHTLIEEDPQYRRAGPVVRVE
QMFEEIIARLPGHPDFLLCVLPERKNSELYGPWKKKSLTDLGIVTQCISPLKITDRYLTN
VLLKINAKLGGTNSLLAMEHTSHLPLIKDTPTMILGMDVSHGSRVQSDIPSIAAVVGSLY
WPLISKYKAVVRSQSPKLEIVESLYKPLPNGDDEGIMRELLLDFYRTSNRHKPAQIIVFR
DGVSESQFSQVLNLELDQMIKAYKHLGEGGNPKFTLIVAQKNHHTKLFQANAVDNVPPGT
VVDTNIVHPRNNDFFMCAHAGMIGTTKPAHYHVLLDEIGFAPDVLQNLIHSLSYVYQRST
SATSIVAPVRYAHLAAQQFGQFDKYEDHSETLSEQGSVKSIGTTPVTQLPRLHKNVSDSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagtgagggaagagagagttgtttctcacctgtggaagaaccgccaccagtt
ataatgtcaaatgcagagccagagagagttgatcagcccaagcgtactataatgatgagg
gctggggatggaacatctggacgagagatttctttgcttgcaaaccacctaaaagtttct
atcaagtgtcctgatgaaatattttaccattatagtgtctctataacttctgatgaaaag
agggccgttaacagcaaggtgattagaagaaaaattgtagataaacttcacgaaacatac
tcatctgaatttgctgggaagaaatttgcttatgatggagagaagaatttgtacacagtg
ggacctctaccacgcaacagactggaattcacggtggttgttgaggagtctagtgcacgg
caggctagtgagagcccctcagataatggaagcctcaatcactccattaaaaggtttaag
cattctcttcattcgaaggctttcctggtggagatcgactatgcagctaaaataccatta
aggtctgttgatcttgcccttcaaggagctgatccagaaaatgttcaagatgcattgagg
gttctagatattatattgcgacaaaaagctgctaatagaggatgcctcttggttagacag
tcattttttcatgatgactcaaggaacttcacagatgttggagggggtgtaatgagttgc
agggggttacattccagctttcgtccaactgatggtggcttgaccttgaacatggatgtg
tctacaactatgatcctatcacctggacctgtaattgattttttgcttgctaaccagaat
gtaaaagagcctcgttatattgattgggcaagagcaaaaagaatgttgaagaatatgaga
gttaaagctaagcatgacaacagggaatttaaaattatcggtttgactgacaaaccttgc
aatcaacagttattttctatgaaggtcaaaaatggtggcagtccagatgatggaggagag
accctagatataactgtttatcagtatttcactaaacatcgtaacatagaactttcatcc
tcagtttatatgccatgtctggacgttggaaaaccaaaacgaccaaactatctgccactg
gagctgtgttatttggtctcccttcaaagatacacaaaggcattatcatcggtccagagg
gcatctttagttgaaaaatcaaggcagaagcctcgtgaaagaattaaagttataacagat
gctgtgagggactacagctatgacgatgatccccttcttgttgcttgtggaatctcaata
gaaaagcagttgattcaaatgaacggcagggtccttgaagccccaaagttgaaggttggt
aatggcgaagaggtcactccctgtgacggcaggtggaatttcaagaacaagcatcttttc
aaccctgcacgaattgaacgctgggcagtggtcaacttctctgccaattgtgatacaagt
cacctttcaagggagcttattagttgcggaaggagcaaaggcattcattttgagcgccca
catacactcattgaggaagatccccagtataggcgagctgggcctgtagttcgagtagaa
cagatgtttgaagagataatagctagactgcctggccatcctgatttcctcctctgtgtc
ttgccagagcggaaaaactcagagttatatggaccttggaagaaaaaaagtttgactgac
ttgggaattgttactcaatgtatctctccgttaaagatcaccgatcgatatctaacaaat
gtgcttctcaaaattaatgctaagcttggagggaccaattcactgttggctatggaacat
acctctcatctaccgcttattaaggacactccaacaatgatcctgggaatggacgtctct
catggatctcgtgttcaatcagatattccatcaattgctgcggttgtaggatccttatac
tggccattaatatccaagtataaggcagttgtgcgcagtcaatctccaaagttggaaatt
gtagaatccttatacaagcctttaccaaatggagacgatgaaggaatcatgagagaacta
cttctggacttctataggacaagtaacaggcataagccagctcaaattattgtcttcagg
gatggcgtcagcgaatcacagtttagtcaagttctgaaccttgagctagatcaaatgatc
aaggcatacaagcatcttggtgagggcggcaaccctaagttcaccttgatcgtggctcaa
aagaatcaccatacaaaactatttcaagctaatgcagttgataatgtaccaccaggtact
gttgtagacacaaatattgtgcatcctagaaataatgattttttcatgtgtgcacatgcg
gggatgattggaacaactaaacctgcacattatcatgtattgcttgatgagattggtttc
gcacctgatgtcctgcaaaatctcatacattcactatcatatgtgtaccaaaggagtacc
agcgcgacctctattgtggctcctgtgcgttatgcacacctagcagcacaacaattcggg
cagtttgataagtacgaggaccactccgaaactttgtcagaacagggaagtgtcaaatca
attgggactactccggtaacccaactgcccaggctgcacaagaatgtcagcgactcaatg
tttttctgttga
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