Solanum lycopersicum (tomato): 101264897
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Entry
101264897 CDS
T02665
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101264897
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101264897
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
UnbV_ASPIC
Transposon_TraM
Motif
Other DBs
NCBI-GeneID:
101264897
NCBI-ProteinID:
XP_004251990
UniProt:
A0A3Q7J5M0
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Position
12:9872511..9874843
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AA seq
395 aa
AA seq
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MSNFKTMTCTIVSLLLLFCLNITIPCCLAYNVVSFGARGDGRTDSTSAFLRAWSAACRST
SQPNVYIPRGTFLVRTLNLNGPCKRRIEFRIDGTLVAPVNYNAIGHSEFWIMFYKVSGLN
VYGGTINAKGHGYWSCRNGGKSCPQGARSIQFMWCNNVLLKGLTSLNSQRVHIGIGYSSN
VRVENVKITAPSGSPNTDGIHVQNSRGVTIKDSIIKTGDDCISIGPGSMNMWIEQIGCGP
GHGISVGSLGSSNNEQGVVNITVTNSVFTKTQNGVRVKSWARPSGGYARNLMFSNLIMRN
VGYPILIDQNYCPDNNCPRQNSGVKVSQVTYKNVKGTSSTQEAIKFDCSKSNPCTGIRLQ
DIKLTHNDRLRRSAVSYCRNARGRRGGTVIPRSCF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatttcaaaaccatgacatgtactattgtttctttgttgttattgttttgttta
aatataacaataccttgttgcttagcttacaatgtggttagttttggcgcaaggggagat
ggtaggacagattcaacctcggcttttctccgcgcttggtctgctgcctgtcgttctact
agccaacctaacgtgtatattccacgaggaacgtttttggtgaggacgttgaacttaaat
ggtccttgtaagagacgaattgagttccgaattgatggtactctcgttgctccggtaaat
tataatgcaattggacattctgagttttggattatgttttataaggtaagtggtcttaat
gtgtatggtggaactattaatgcaaagggacatggttattggtcttgtagaaatggtgga
aagtcttgtccacaaggagctaggtcaatacaatttatgtggtgtaacaatgtactgttg
aagggtttgacatcactaaacagtcaaagagtacacataggaattggttacagcagcaat
gtcagagttgaaaatgttaagataacggctccaagtggaagtccaaatactgatggaatt
catgttcagaattcaaggggggttaccattaaagatagtattataaaaacaggagatgac
tgtatttctattggccctggttccatgaacatgtggattgaacaaattggatgtggacca
ggacatggtataagtgtagggagtttggggagcagtaataatgaacaaggagtagtaaat
ataacagtaacaaattctgtttttacaaaaacacaaaatggtgttagagtaaagtcatgg
gcaagaccaagtggtggctatgctagaaatctcatgttctcaaatcttattatgagaaat
gttgggtaccctatactcattgaccaaaattattgtcctgataataattgtccgcgacag
aattcaggagtaaaagtgagtcaagtaacgtacaagaatgtgaaagggacatcatcaaca
caagaagctataaaatttgattgtagtaagtcaaatccatgtaccggaattcgattgcaa
gatataaaacttactcacaacgatcgtttaagacgatcagcggtatcgtattgtagaaat
gcaaggggaagacgtggtggaacagttattccaaggagttgtttctaa
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