Solanum lycopersicum (tomato): 101264935
Help
Entry
101264935 CDS
T02665
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77-like isoform X3
KO
K08518
syntaxin-binding protein 5
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101264935
Membrane trafficking [BR:
sly04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101264935
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101264935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_VPS8
WD40
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Beta-prop_TEP1_2nd
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
101264935
NCBI-ProteinID:
XP_010322180
LinkDB
All DBs
Position
6:37255241..37273475
Genome browser
AA seq
1074 aa
AA seq
DB search
MFAKFFEKLNPTPQSNAPEGSEKLTDLEATVSVHYGIPSTASILAFDPIQQLLAIGTLDG
RIKVISGSNVEGLFFSPKPLAFKNLEFLQNQGFLVGVSNGNEIQVWDLENRRISSSLQWE
SNITAFSVIYDTHYMFVGDEYGYLSVLKYEEGIMELLPYHMPPNLIAEAANISMPDQLAI
VGLLPQPNSHGNRVLIAYENGLIVLWDITEDRAALVREYKQHQSKDEIVVYALKNAKEEK
FRASSDNQEGEKEISSLCWLSSDGSILAVGYIDGDILLWNISVPGKKSPEAEASSNYVKL
QLSAGAKRLPVIILRWSAKNTQNGCGGKLFVYGGDSIGSEEALTVLNLDWSSGIKALKCV
GRVDLGLDGSFADAIVVSNANETGISDASSLFVLSNPGKLHFYDKASLSALKSNPEKEHA
DFAVKYPTLVPTLEPRITVAYLYPVDRKWNSSRTPSEEVVVALVRPAHGVTELEIKMPLS
SSIPRQPTKDDGIERILVAGYLDGSVRLWNATFPVFTLLAVLESQGIQATGPRTAISALD
FSSTALNLAIGHQCGQVHMYSLKGQSKTTSSKLVTDAEQDAQFCPGDTGFQFSLIKSPVC
ILKFVAVGARLVAGFESGQVAMLDVSSSSVLFITDCSSNSSSRITSVAVTSLGNALEDTA
EQSEEGTRNACVKDVISVLNRDAEVVLLDGSTGKKIGSQAKHQKEMSTAISLHVLDGITL
VSEESQKHSSTQDSAVQPEDLMQKCIDSQILLCCQEGLHLFSLSSIMQGDIKPIREVKLA
KPCSWTSILKNDIENFGLVLVYQNGAVEVRSLVDLAVLGESSLISILRWNSKINVDKIIS
SPGQSMISLVNGSEFAVISLLAFGNDFRVPDALPLLYKKSPATAVDDASASQHQKKKQNV
TTSIFGGIVKGLKGLKGEQAADSVNARDALVSHLENIFSRFPFSDPTDVTDDLGSLELKL
DDIEIDEPVHVASSSLSSDDVKIEKETDRNRLLEGGSSDAKPTARTREEIIAKYRNKGDA
ASAALQAKDKLLERQEKLDRLSRNTEELQNGAENFADLAGELVKAMEKRKWWNL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaattttttgaaaagctcaatcctacgccacagagtaatgctcccgaagga
agtgaaaaattgacagacctggaagcaacagtttctgttcactatgggattccatctaca
gcatccattctggcatttgaccctattcagcaactcttggcaataggaacattggatgga
aggattaaagtgattagtggatctaatgtcgagggcctttttttttctcctaaaccattg
gcgttcaagaatttggagttcctgcaaaaccaaggatttttagtgggcgtctcaaatgga
aatgaaattcaggtttgggatctagagaacaggagaatatcttctagtttacagtgggag
tccaatattactgcattctccgttatctatgacactcattacatgttcgtgggagatgaa
tatggttatctctctgttctgaagtatgaggaaggaatcatggaactgttgccttatcac
atgcctccgaatcttatagctgaagctgctaatatttcaatgcccgaccaactcgccatt
gttgggttacttccccaacctaattcacatggaaatagggtcctgattgcttatgagaat
ggattaattgttctctgggacattacagaagatcgagctgctcttgttagagagtataaa
caacatcaatcaaaggatgaaattgttgtttatgctttaaaaaatgctaaggaagagaag
tttcgtgcttcatcagataatcaagaaggcgaaaaagaaataagctcactctgttggttg
tcatctgatgggtcaattttggctgttggttatattgatggagatatcttgctgtggaat
atttcagttcctggcaagaaaagtccagaggctgaagcttcgtctaattatgttaagctg
cagctctcagcaggagccaaaagactccctgttattatactgcgttggtccgccaaaaat
acacagaatggttgtggggggaaactatttgtctacggtggtgattcaattggatcagaa
gaagccttgacggttctgaatcttgattggtcctccggaataaaagcactgaaatgtgtt
ggtcgagtagaccttggacttgatggatcttttgcagatgccattgttgtttcaaatgct
aatgaaacgggaattagtgatgcttcttccttgtttgtgttgtcaaatccagggaaactg
cacttttatgacaaggccagcttgtctgctttaaaatctaacccagagaaggagcatgca
gattttgctgttaagtatcctacacttgtacctacccttgaaccacgtataactgtggca
tacctatatccagtggataggaaatggaattcctcaaggactccttcagaggaagttgtg
gttgcgctagtccgtccagctcatggtgtgactgaattggaaatcaaaatgcctctaagt
agtagtattcccagacaacctactaaggatgatggaatagagagaatacttgttgctggc
tatctggatggatctgtccgtctgtggaatgcaacatttccagtctttacacttttagct
gttctggaatctcagggaattcaagccactggtcctagaacagcaatatccgctttggac
ttctcctctactgctttaaatcttgccatcggccaccaatgtggccaggtgcatatgtat
agcctcaaggggcagtctaagacaactagctccaaattggttacagatgctgaacaggac
gctcagttctgtccaggtgatactggatttcagttttccctcataaaatctccagtatgc
atcctaaaatttgtagctgtgggtgccaggcttgttgctggttttgaaagtgggcaggtt
gccatgcttgatgttagttcatcatcagttttgttcattacggattgttcatccaactca
agttccagaatcacttctgtggctgtgacatcattgggtaatgctcttgaagacactgcg
gaacaaagtgaagagggaacaagaaatgcatgtgtgaaggacgttatttcagtactaaac
agagatgcagaagtagtattgcttgatggctccactggcaaaaaaattggctcccaggca
aaacaccaaaaggagatgtcaactgctatatctctacatgttttagatggcattacattg
gtctctgaagaatcgcaaaagcattcttcaacgcaagacagcgccgtgcagcctgaagat
ttgatgcagaagtgtattgattcacaaattttactttgttgtcaggagggcttgcattta
ttctccttaagttctataatgcagggcgatatcaaacctatacgtgaagtgaaacttgct
aaaccatgttcttggacttccattcttaagaatgacattgaaaattttggactggtttta
gtgtatcagaatggagcagttgaagtaaggtccttggtggatcttgctgtcttgggagaa
tcctcattaatatctattcttcgatggaattccaagataaatgtggataagatcataagt
tctcctggtcaatcgatgatttcactggtgaatgggtctgaatttgctgtcatttcactg
ttggcctttggaaatgacttcagggttccagatgccttacctttactttataaaaaatca
cccgcaactgctgtagatgatgccagtgcatcccaacatcaaaagaagaaacagaatgtt
accaccagtatttttggtggtatcgtgaaagggttgaaagggcttaaaggagagcaggct
gctgattctgtgaatgctcgagatgctcttgtttctcatctggaaaacatattctcgaga
tttcctttctcagaccctacagatgtaacagatgaccttggaagcctggaactgaagtta
gatgatattgaaattgatgaacctgttcatgttgcttcatcatctctcagcagtgatgat
gtcaaaatagaaaaggaaaccgatagaaacaggttgttggaaggtggttctagtgatgcc
aagccaacagctagaactcgtgaagaaatcattgctaaatatagaaacaagggggatgcg
gcctctgctgcattacaggcaaaagataagcttctcgagcgtcaggagaaacttgatagg
cttagtagaaacactgaagaattacaaaatggtgcggagaactttgcggatcttgcaggt
gagcttgtcaaagccatggagaaacgcaagtggtggaacctctaa
DBGET
integrated database retrieval system
