Solanum lycopersicum (tomato): 101265008
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Entry
101265008 CDS
T02665
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101265008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101265008
03051 Proteasome [BR:
sly03051
]
101265008
Membrane trafficking [BR:
sly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
101265008
Proteasome [BR:
sly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101265008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
TBK1_ULD
UBA_7
Dsc3_N
UBA_HOIP
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
101265008
NCBI-ProteinID:
XP_004234514
UniProt:
A0A3Q7FI77
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All DBs
Position
3:complement(5911255..5921562)
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AA seq
557 aa
AA seq
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MSMGGGDASVPAGDSGDSNKVSNTGAGGGVTINIRCSSGSKFSVQVSLDSTVGSFKSILA
QQANIPAEQQRLIYKGRILKDEQTLESYGLEADHTVHLVRGSAPAPSANPACAPNVGGPN
TAQNAPRSAASDAGGPFPGSGLGASMFPGLGSGGGGGLFGAGLPDFEQVQQQLTQNPDMM
RDMMNMPLVQNLMNNPETIRNLIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPE
LMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNASTLSGDTRNDAGSNPFAALL
GAQGGLGRQQANNPPTAGSETTDNLPAPNTNPLPNPWASAGTGAAQANTAARSNTAGDTR
GAPLGLGGLGSPGLEQMLGGMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGMNPQL
RSMLDSNPQLREMMQNPEFIRQLTSPETVQQLMTFQQGLASQLGRQQTNQQPGQNAGGAA
LDNSGMEMLMNMFGGLGTGGLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRALTAS
GGNVHAAVERLLGNLGQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgggaggcggagatgctagtgttccggcgggagacagcggcgattcaaacaag
gtgagtaacaccggcgccggcggaggtgttacaatcaacatccgatgttctagtggctcg
aaattctctgtgcaggtcagcctcgattctaccgtcggatcgttcaagtctattcttgca
caacaagccaacattcctgctgagcaacagagattgatctataaaggtcggatcttaaag
gatgagcaaacactagaaagctacggtctggaggcagatcacacggttcatttagttcga
ggttctgccccagctccctctgcaaaccctgcatgtgcacccaatgttggaggtccaaat
actgctcagaatgcaccaagaagtgctgcttctgatgcaggtggaccatttccaggatca
ggccttggagcttcaatgtttcctggtcttggaagtggtggcggcggcggtttgtttgga
gctggtcttccagattttgagcaggtccagcagcagttgactcaaaaccctgacatgatg
agagatatgatgaatatgcctctggttcagaatttaatgaataaccctgaaaccatccgt
aacttgatcatgaacaatccccaaatgcgagagatcatggatcgtaatccggagcttgct
cacgtactcaatgatcctgctactcttcgacagacaatggaggctgcacgaaaccctgaa
cttatgcgtgagatgatgcgcaatacagacagggccatgagcaatattgaatcttctcct
gagggatttaacatgctgaggcgtatgtatgaaaatgttcaggagccattcctaaatgca
tcaacattgtctggagatacgcgaaatgatgcggggtctaacccgtttgcagctcttttg
ggagcacaaggtggactaggcagacagcaggcaaataatcctccaactgctggttctgag
actactgataatctgcctgccccaaatactaatccacttccgaatccttgggcatctgca
ggcactggagctgcccaagccaataccgctgctaggtcaaatactgctggggataccagg
ggtgcaccacttggcctaggtgggcttggttccccaggtttggagcaaatgctaggcggc
atgcctgatactacttcgctaaatcaaatgatgcagaaccctgccatctcacagatgatg
cagtctctcctttcaaatccacagtacatgaaccaggttttagggatgaacccacagctt
agaagcatgcttgattccaatccacagctcagagaaatgatgcaaaatcctgaatttatt
cgtcaattgacatcgcctgagacagtgcagcaacttatgactttccagcaaggacttgca
tctcaacttgggcgtcagcaaacaaaccaacagccgggccaaaatgctggtggagcagca
cttgacaactcgggaatggaaatgcttatgaacatgtttggtggacttgggaccgggggc
ttgggtgtccctaacagatctaatgtgcccccagaggaattatatgctactcagctaacg
cagttacaagaaatgggtttctttgacactcaagaaaatatccgggcactgactgcctcc
ggtggcaatgttcatgctgctgtagagcgacttcttggaaatcttggacaatag
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