Solanum lycopersicum (tomato): 101265028
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Entry
101265028 CDS
T02665
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00510
N-Glycan biosynthesis
sly00513
Various types of N-glycan biosynthesis
sly01100
Metabolic pathways
sly04141
Protein processing in endoplasmic reticulum
Module
sly_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
101265028
00513 Various types of N-glycan biosynthesis
101265028
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101265028
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Ig_SMCHD1_1st
Motif
Other DBs
NCBI-GeneID:
101265028
NCBI-ProteinID:
XP_004240128
UniProt:
A0A3Q7GHL8
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Position
5:complement(61714873..61728259)
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AA seq
689 aa
AA seq
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MAKVLGFLVLALSVLICEAAIFKPISESHRSAALELFTPAHGSLSSLEETYEALRTFEVL
GIKKQPDQRVATCVTVGDTLSSPTSALKDLFQALRVNGLLNCELNKKTLAGIAPRLKDAV
KSASSLLDYYYSVGSLVLIKGLNSDVDVHLESADSVVRSIKALSQSDGRWRYSSNNPEFS
TYAAGIALESLAGVISLASSEIDQSLISMVKSDISKLLDGLEKYDDGAYYFDEKLADAHG
HQGPLSASSAVVRGITAFAAVSTENLNLPGDKILGLARFLLGAGVPGNAKDLYYQIEALA
SLENNRVSIPLILSLPTSVLSLTRKDQLKVKVNTVLGATAPSLTVKLKQIFSSGSKDASV
IDQDLKFDHKNGVHYLDALRKDIDVGSYIFSFEIVLHDSEHKMIYATGGRTKVPIYVTGV
IKVDNADISVLDSDLGNIETRKKLDLAGKNSISLSANHLQKLRLSFQLTSPLGNALKPHQ
AFLKLSHESKVEHIFVVGNSGKQFEIILDFLGLVEKFFYLSGRYDIQLTVGDAVMENSFL
QPLGSVELDLPEAPEKAACPPPQAVDPSSRFGPKAEIAHIFRAPEKRPPSNLSYAFLALV
LLPFVGFLVGLLRLRVNLKNFPTASAPAAFAILFHLAIVAVLSLYSLFWLKLNLFTTLKA
LGFLGIFLLFVGHRTLSHLASTSAKLKSA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagttttaggatttctggtactagcattgtccgtattgatctgtgaagcggca
atcttcaaacctatctccgaatctcaccgatctgctgcattggagttgtttactcccgct
catggatctttgtcgagtctggaagaaacatacgaggccttaaggacatttgaagttctt
ggaattaaaaaacagcctgaccaaagggttgctacatgtgtgacggtgggggacactttg
tcatctcctacttcagcattgaaagatctgttccaggcattaagagtcaatgggctattg
aactgcgagcttaacaagaagacattagcaggcatagccccaagacttaaagatgctgtg
aaaagtgccagctcacttcttgactactactattcggttggaagtttagttcttatcaag
ggcctaaattctgacgtggatgtacatcttgaaagtgccgattcagttgtccgctccata
aaggctctcagccaaagtgatggaaggtggcgttatagctccaacaatcctgagtttagc
acttatgctgcaggaattgcacttgagagcctggctggtgtcatttcattagcttcttct
gagattgatcaatctttgattagcatggtgaaaagtgatatatcgaagcttcttgatggt
ctagagaaatatgatgatggagcctattactttgatgaaaaacttgctgatgctcatgga
catcagggtcccctctcagcttcatcagctgtagtgcgtgggattacagcttttgccgcg
gtgtctaccgaaaatttaaatcttccaggtgacaaaattctaggtctggcaaggtttctc
cttggtgctggagttcctggaaatgcaaaggacttgtattatcaaattgaagcattggct
tctttggaaaacaatagggtctccattccattgatattatcactccccaccagcgttctt
tcattgactagaaaggaccagcttaaggtaaaagtaaacactgttttgggggctactgca
ccttctctgacagtcaaactgaagcagattttcagctctggttcaaaggatgcctctgtt
attgatcaggatctcaaatttgaccataaaaatggcgtgcattacttggatgctttgcgt
aaagacattgatgttggcagttacattttcagttttgagattgttcttcatgattcagag
cacaaaatgatctatgccactggaggaagaacaaaagtacccatatacgttacaggagtt
attaaagttgataatgcagatatttctgtacttgacagtgatcttgggaacattgaaact
cgtaaaaagcttgatttggctggaaagaactccatctccttatcagcaaaccatcttcaa
aagctacggttgtcatttcaattaacttctcctcttgggaatgctttgaagccacaccag
gctttcctcaagttgagtcatgagagcaaggtggagcatatctttgtggtcgggaattct
ggaaaacaatttgaaataatactagatttccttggacttgttgaaaagtttttctatcta
tcgggtagatatgatattcaacttactgttggagatgctgtaatggagaactcgttcttg
caaccattgggatctgttgaattagatttgccagaggctccagagaaggcagcatgccca
cctcctcaggctgttgatccttcctctagatttggccccaaggcagaaatagctcacatt
tttagggctccagagaaaagacctccgagcaacctttcttatgcatttctggcccttgtt
cttttgccattcgttggatttttggttgggcttttgagactacgtgtgaacctgaagaac
ttcccaacagcatcagcacctgcagcatttgccatcctttttcaccttgccattgtggcc
gttctgtcactttattctctgttctggttgaagttgaatctgttcacaacactgaaagca
cttggattcttagggatcttcttactgtttgttggacacagaaccctttcacatctggca
tccacatctgccaagttgaaatctgcctga
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