Solanum lycopersicum (tomato): 101265205
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Entry
101265205 CDS
T02665
Name
(RefSeq) eukaryotic translation initiation factor isoform X1
KO
K03260
translation initiation factor 4G
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101265205
03012 Translation factors [BR:
sly03012
]
101265205
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101265205
mRNA cycle factors
Stress granule specific factors
101265205
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
eIF-4
101265205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
101265205
NCBI-ProteinID:
XP_004251742
UniProt:
A0A3Q7J3U5
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Position
12:3519343..3526985
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AA seq
773 aa
AA seq
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MQADQTVISLRPGGGNRGGGSRVFGSRFDTSSTNSDLSGFRPHGGSSSLPSFKTGDSRFD
SHERVRYTRDQLLQLREAVVLQLPEVILQIKHEVEAELFGEDSSRGRVDSNVQVQSQGRY
SEPDNRDWRNRPAQFSAPIEERSWEALRENREFGGQYTRQEQSQFARAQVSANQGGGPAP
TLIKAEVPWSVRRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILEGVI
SLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDK
LREEMRRMTAPEQESERKDKERLIKLRTLGNIRLIGELLKQNMVPEKIVHHIVQELLGQD
PKSCPEEENVEAICQFFNTIGKQLDKKQKSRHINDIYFNQLKELSTNPQLVARLRFLVRD
VLDLRANNWVPRREEVKAKTINEIHSEAEKTLGLRPGATLSIRNARAPPGIQGNLGPGGY
PINRPGTGGMMPGMPGARKMPGMPGMDNDNWEVPRSRMPRGAQQPLIGKSPALNTRLLPQ
GSNVGMSGRSSALLQGSGGPPVRPSGYVSGMEPVSQVPVPVKPSPTSTVLPVAGKPQAPA
ARSNPEELKRKTVSLLEEYFSVRILDEALQCIEELKSPAFYPEVVEKAISLGLDKSPPRV
EPVAQLLEHLSAEKVFTATDLATGCLNFASQLEDLAMDLPKAPANFGEIISRLVLTGAMD
FKLVNEILQKVTDDLYQKDLFAAIMKAISSSPTGQGVLDSQAPDVKACKNLFQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgatcagacggtgataagtttgagaccaggtggtggtaacagaggtggtgga
agcagagtatttggctctcgctttgatacctcatctaccaattctgatctctcaggtttt
cgtcctcatggaggttcttcatctttgccatctttcaagactggagattctcgttttgac
agccatgaacgtgttcgctatactcgagatcagctcctgcaactgagggaggcggttgtc
ttacagttacctgaggttattctgcaaatcaaacacgaagttgaagctgaactgtttggg
gaagattcctctcggggtcgtgtggatagcaatgtgcaggtgcagtctcagggtcgttat
tctgaaccagacaatcgtgactggcgtaataggccagcacaattttctgcccccatagag
gagaggtcatgggaagcacttcgagaaaacagggaatttggtggccagtatactcggcaa
gagcaatcacagtttgcaagagctcaagtttctgccaatcaagggggaggtcctgctcct
acactgatcaaagctgaggtgccatggtcagttcgaaggggcactctttctgacaaagat
cgtgtcttgaaaacagtcaagggaatacttaacaagttgaccccagagaaatttgatctt
ctcaaaggccaattaatagattcagggataacaagtgcagacattctggagggtgtgatc
tccttgatatttgacaaggctgtattggaacccaccttttgcccgatgtatgcccagttg
tgttctgatctcaacgagaagcttcctccatttccatctgatgaacctggtgggaaagaa
atcacgtttaagcgagttcttctgaataattgccaagaggcatttgaaggttctgacaaa
ctgagggaagagatgagacgaatgactgctccggagcaggagtcggaacgcaaggacaaa
gaaaggttgatcaaattgcgcactcttggaaacatacgtcttattggggagctattgaag
caaaatatggttcctgaaaagattgttcatcacattgttcaggaactattaggacaagat
cccaaaagctgtccagaagaagagaatgttgaagctatatgtcagttctttaacaccatt
ggtaagcagcttgacaagaagcaaaagtcgaggcacatcaatgatatatatttcaaccaa
ttgaaagaactatcgacaaaccctcagctggtagcacgcctaaggtttttggttcgtgat
gtgctggatttacgtgccaataactgggtccctaggcgggaagaggtgaaagccaaaacc
attaacgagatccactcggaagcagagaagaccttggggttgcgtcctggtgctacatta
agcattagaaatgctcgtgctcctccaggtattcaagggaatttgggtcctggtggctat
cccattaatcgacccggcactggtggtatgatgccagggatgccaggagcaaggaagatg
cctgggatgccaggaatggataatgacaactgggaagttcctaggtcacgaatgccgaga
ggtgctcagcaaccattgattgggaagtcgccggccttgaacacaagactgttgcctcag
ggtagcaatgtcggcatgagtggcaggagtagtgctctcttacaaggtagtggtggacct
cctgtccgaccatcaggctatgtctctggtatggagcctgtatcacaagttccagtacca
gttaagccatctccaactagtaccgttttgcctgttgctgggaaacctcaggctccagct
gcaaggtcaaatcctgaggagctgaaaagaaaaacagtttcacttttggaggaatatttt
agtgttcggattttggatgaagccttacagtgcattgaggaactcaaatcccctgccttc
tatcctgaggttgtcgagaaagccatatcactcggactggacaaaagcccaccacgcgtt
gaaccagttgcacaacttcttgagcacttgtctgctgaaaaggtttttactgctacagac
ttggctactggatgcttgaactttgcttctcaattggaagatcttgcaatggatttacca
aaagcaccagcaaatttcggggagataatttcgaggctagttttgacgggggcaatggac
ttcaagttggtgaatgagatcctgcagaaggtaaccgatgacttataccagaaggactta
tttgctgccatcatgaaagctattagctctagccctactggtcaaggagtgttagactca
caagcacctgatgtcaaagcctgcaaaaatctgttccagtaa
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