Solanum lycopersicum (tomato): 101265207
Help
Entry
101265207 CDS
T02665
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101265207
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101265207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
101265207
NCBI-ProteinID:
XP_004251991
LinkDB
All DBs
Position
12:10306325..10308495
Genome browser
AA seq
394 aa
AA seq
DB search
MSFLVKNLPLFFTIFFLLFNSSIAIYNIKNYGAKSNGKIDSSTAFMSAWDAACASTSPST
IYIPQGSYLLKNAYFQGQKCKSKSITLRIDGTILAPSDYNVNRNEENWIKFERVNGISIY
GGTLDGQATSLWACKTSSNNCPQGTMGVTFSNSSNINIIGLTSQNSQMFHILVDNCENVK
LQGVKISAPGNSPNTDGIHVQYSSRVTIMNSRIGTGDDCISIGPGTSNLWIENIECGPGH
GISIGSLGWELQEPGVQNVTVKTVTFKGTQNGLRVKTWARSSYGFVKNILFQHIVMMNVQ
NPIIIDQNYCPNNENCPHQGSGVKISDIKYRDIRGTSATEVAVKFDCSKKYPCSGISLED
VNLSYKNQPAEASCANAGGRAFGFQKPNSCLWFN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttagtcaaaaatctcccactctttttcacaatcttcttcttgctcttcaac
tcttccattgctatatataacatcaaaaactatggagcaaaatcgaatggcaaaatcgat
tcatcgacagcctttatgagtgcatgggatgcagcatgtgcatcaactagcccatccacc
atttacataccacaaggaagttacttgcttaaaaatgcatattttcaaggccaaaaatgc
aagagtaagtctattaccttacgtatcgatggcactattctagctccatcggattataat
gtcaatagaaacgaagaaaattggatcaaatttgaacgagttaatggaatttccatctat
ggaggaaccttagatggacaagctactagtctttgggcttgcaaaacgtctagcaacaat
tgtcctcaaggaacaatgggagttacattttcgaactcaagcaacataaatatcattgga
ttaacatcacaaaacagccaaatgttccacattttggtagataattgtgaaaatgtgaag
ctacagggagtaaagatctccgcgccaggaaacagtccaaacactgatggtattcacgtc
caatattcatctagagttacaataatgaactcacgtattggtactggagatgattgcatc
tcaattggccctggcacctctaatttatggattgaaaacatagaatgtggacccggtcat
ggaataagcattgggagtttaggctgggaattacaagaacctggagtacaaaatgttacg
gttaaaaccgtaacgtttaaaggaacacaaaatggattgagagtaaaaacatgggcaaga
tcaagctatggatttgtcaaaaatattcttttccaacatattgttatgatgaatgttcaa
aaccctattattattgatcaaaattattgccctaacaatgaaaattgtcctcaccaaggc
tcgggtgtaaagatcagtgacataaagtatcgagacatacgtggaacatcagcgacggaa
gttgctgtgaaatttgattgtagcaaaaaatatccatgtagtgggatatcacttgaagat
gtaaatcttagctataaaaatcaaccagctgaagcttcttgtgctaatgctggaggaaga
gcttttggttttcaaaaaccaaatagttgcttatggtttaattag
DBGET
integrated database retrieval system
