Solanum lycopersicum (tomato): 101265274
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Entry
101265274 CDS
T02665
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101265274
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sly04812
]
101265274
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101265274
Cytoskeleton proteins [BR:
sly04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
101265274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TOR1L1_N
PDS5
Adaptin_N
Cnd1
HEAT_Maestro
INTS1_R4
UTP20
MMS19_C
Sec7-like_HUS
Tti2
MMS19_N
mTOR_dom
INTS7_N
SEN1_N
Dopey_N
SPO22
DUF6279
Motif
Other DBs
NCBI-GeneID:
101265274
NCBI-ProteinID:
XP_004247111
LinkDB
All DBs
Position
9:complement(57760490..57776215)
Genome browser
AA seq
1426 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHELLEASRKSLSSSEVTSLVDVCIDLLKDNNFRVCQG
ALQSLDSAAVLSGEHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSYAWMHRSFRVREEFARTVTSAIGLFASTELPLQRTILPPILQMLSDPNPGVRDAAI
SCIEEMYSQAGPQFRDELQRHHLPTMMLKDINARLEKIEPKNPLADGVSRNYAATEVRST
GLNPKKSSPKAKNSTREVSLFGGDADITEKPVEPIKVYSEKELVREFEKIASTLVPEKDW
SIRISAMQRIEALVIGGATDFPCFRGLLKQLVVPLSTQLSDRRSTIVKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADTCIKTMLRNCKVARALPRIADCAKNDRN
AVLRARCCEYALLILEHWPDASEIHRSAELYEDLIKCCVGDAMSEVRSTARTLYRMFART
WPERSRRLFMSFDPVIQRIINEEDGGTHRRHASPSVRERSSHFSLGSQTSASSQISGYGT
SAIVAMDRSSSLPSGTSLSTGLLLSQTKPVGTGTERSLESVLHASKQKVSAIESLLKGLD
MSERSRSSSLDLGVDPPSSRDPPFPLAVPASNSLANALVDAPSGFSKGKNRNGGLGLSDI
ITQIQASKDSTKSSYRGSAVHESFSGLNSYSARRASEKLPDRGFVEDNAELREGRRLMNS
HVHRQYIESPYKDANFRDSHYNHVPNFQRPLSRKNTAGRMSSSKRRSFDDSQLPLGEMSS
YVEGPASLSDALSEGLSSSSDWNARVAAFNYVKSLLQQGPRGFPEIMQSFEKVMKLFFQH
LDDPHHKVAQAALSTLADLIPACRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLEIV
SKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFSIGSFNKHPSNSEGAGNSGILKLWLAKL
TPLVYDKNTKLKEAAISCIISVYTHFDGTGVLNFILSLSVEEQNSLRRALKQYTPRIEVD
LMNFLQNKKERQRSKYDPYDVTGTSSEEGYVGASKKNNLFGRYSAASVDSDGARKWNSVP
DPTYMTSSVGHSLSDDTQDFYHGVEAGANSDFPVSKAKDSKLSASGSDGIWANSQKSNDD
SLNMEHTSTTRLEVNGLVDSEHLAAADNESDLGLNHLKLSALKINLTPATEPSIPQILHS
ICNGNDGSPAANKHDALQQLVEAVTKDQSIWSKYFNQILTAVLEVLDDSASSIRELALSL
IVEMLKNQRDAMEDSVEVVIEKLLNVTKDVSPKVSNEAEHCLTTVLSQYDSFRCLSVVVP
LLVTEDEKTLVTCINCLTKLVGRFSQEELMSQLSSFLPALFDAFGNQSADVRKTVVFCLV
DIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDANRS
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggaattggcgcgagccaaggatacgaaggagagaatggccggtgtg
gagagacttcacgaacttctcgaagcttctagaaagagtctctcttcttctgaggttact
tcgcttgttgatgtatgcatagatcttcttaaagacaacaacttcagggtctgtcagggt
gctttacaatcacttgattccgctgctgttctatctggtgaacattttaagcttcatttc
aatgctcttgtacctgccgttgtagaaagattgggcgatgctaaacagccggttagagat
gctgccaggcgattgctgcttactttgatgcaggtttcttcaccaactattatcgttgag
agggcagggtcttatgcttggatgcacagaagtttcagagttcgagaagaatttgctcgt
actgttacatcagcaattggtctttttgcatcaactgagctgccccttcaacgaactatt
cttcctccgattttgcaaatgttgagtgatcctaatcccggtgttagagatgcagccata
tcatgtattgaggagatgtattcacaggctggacctcagttccgtgatgaacttcagcgc
catcatcttcctaccatgatgctaaaagatattaatgccagactagagaagattgagccc
aaaaatcccttagcagatggagtatcgagaaactatgcagctacagaggtgagatccact
ggtcttaatcccaagaaaagcagcccaaaggctaaaaactcaacaagagaggtgtctctt
tttggaggggatgctgatattacggagaaacctgtcgagccaattaaagtgtactcagaa
aaggagttggttagggaatttgagaagattgcctctacccttgtgccagagaaggactgg
tctatccgtatttctgctatgcagagaattgaagctcttgttattggaggtgcaactgat
tttccttgttttcgtggacttctaaagcaacttgttgtccctttgagtacacagttatct
gatcggagatccaccattgtcaaacaggcttgccatctattaaacttcttatccaaagag
cttttgggagattttgaggcatgtgctgagatgttcattcctgttcttttcaagcttgtt
gtgataactgttctcgtaattgcagagtctgctgatacatgcataaaaacgatgttgcgc
aactgcaaagttgctcgtgcacttcctcgaattgctgattgtgcaaagaatgatcgaaat
gcagttcttcgtgcaagatgctgtgagtacgcacttttaatcctggaacattggcctgat
gcatctgagatacaccgttcagcagaactctatgaggaccttataaagtgttgtgtaggc
gatgcaatgagtgaggtacgatcaactgcaagaactttgtacagaatgtttgcaagaact
tggccagaacgatccaggcgtttgtttatgtcctttgatcctgttatccaaaggatcata
aatgaggaagatggtggaactcacagacggcatgcttcaccttctgttcgagagaggagt
tcgcacttttcacttggttctcaaacatccgcttcttcacaaatttctggttatggaaca
tctgcaatagttgctatggatagaagttccagtttaccttcaggcacatccctctcaact
gggttactcctgtcacaaactaaacctgtgggtactggcacagaacgtagcttagaaagt
gtacttcatgccagcaaacagaaagtttctgctatagaaagcttgctcaaaggtctggat
atgtctgagagaagtcgatcctctagtttggatctaggagttgaccctccatcgtctcgt
gatccaccatttcctcttgcagttcctgcgtcaaatagtcttgctaacgctttagtagat
gcaccatctggtttctctaaaggcaagaatcgcaatggcgggttgggtttgtctgatatc
attactcagatccaggcctcaaaggattcaactaaatcatcctatcgaggcagtgcggtt
catgaatctttttcagggcttaattcttattcggcaagaagggcttctgaaaagctacca
gatagaggttttgttgaagataatgctgaactaagggaaggcaggcgattaatgaactca
cacgttcacagacaatacatagagtcgccatacaaagatgctaactttagggattctcac
tataatcatgttccaaattttcaacgtcctttatcaagaaagaacacagcaggaagaatg
tcttctagcaagagaaggagctttgatgacagtcagctcccgctaggagaaatgtcaagt
tatgtcgagggacctgcctcactaagtgacgcattaagtgagggtctcagttctagttca
gattggaatgctagggttgctgcatttaattatgtcaagtctttgctacagcaggggcct
agaggttttccagaaatcatgcagagctttgagaaggtcatgaaattgtttttccagcac
cttgatgatccccatcataaagttgcacaggctgctctatcaacccttgcagatcttatt
ccagcttgtagaaaaccttttgaaagttacatggagaggattttgcctcatgttttttca
cggctaattgatcccaaggaatcagtgaggcagccttgctcaactacattagagattgta
agcaaaacatatggtatcgactcccttttgccagctttgctccgttcattggatgaacaa
cgttctcccaaggccaaacttgctgtaattgagttctcaattggctcttttaacaagcat
ccttcaaattctgaaggtgctggaaatagtggcatcctcaagttatggctcgctaagttg
acaccattggtctatgataaaaataccaaactgaaagaagcggctatttcatgcattata
tcagtgtacacacactttgatggaacaggggttttgaattttattcttagcttatcagtt
gaagaacaaaattctttaagacgagctctgaaacagtatacccctcgtatagaagtggat
ttgatgaattttttgcaaaataaaaaagaaagacaacgttccaagtacgatccatatgac
gttactggcacatcttctgaagagggatatgtaggagcttcaaagaaaaataatttattt
ggaaggtattctgctgcttcagttgatagtgatggtgccagaaagtggaattctgttcca
gacccgacctatatgactagttctgtaggtcactcattgtcggatgatactcaagacttc
tatcatggtgttgaagctggtgccaactctgattttcctgtttcaaaagccaaggattca
aaactttccgcaagtggcagtgatggtatatgggctaattcacagaaaagcaatgatgac
agcttaaacatggagcacacttccacaacccgtctggaggttaatgggttagttgactcg
gagcatctagctgcagctgataatgaatctgatttgggactcaatcacctgaaactttct
gctctgaagataaacttaactccagcaactgaaccaagcattccccagattcttcattca
atttgtaatggcaatgatggaagtcctgctgccaacaagcatgatgcacttcaacaacta
gttgaagctgttaccaaagatcaatccatatggagcaagtacttcaatcagatattgact
gctgtactcgaggtgctagatgattctgcgtcatcaataagagaacttgccctatctctg
atagttgaaatgctgaagaatcagagagatgctatggaggattcagtcgaggttgtaatt
gagaaattgctcaacgtaaccaaggacgtttctccaaaagtctcaaatgaagctgagcat
tgtttaactacggtgttgtctcagtatgattcatttagatgcttaagtgttgttgttcct
ttgcttgtcacggaagacgagaagactcttgtaacctgtattaactgtttgacaaagctt
gtggggaggttctcccaggaagaactgatgtctcagctatcttcattcttacctgccctg
tttgatgcctttggaaaccagagtgcagatgttcgcaagactgttgtgttctgtttagtt
gacatatacatcatgctgggcaaagcatttttgccatacttggaagggctaaacagcaca
cagttgagattggtgactatttatgcaaatagaatatcgcaggctagaacagggactccc
atagatgctaaccgcagttag
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