Solanum lycopersicum (tomato): 101265301
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Entry
101265301 CDS
T02665
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101265301
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101265301
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101265301
NCBI-ProteinID:
XP_004233352
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Position
2:complement(53795419..53797227)
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AA seq
397 aa
AA seq
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MEISKTRTNVALVVLLVTCLTVGAAVAADNSTRRHLAKKYKGPCMATNLIDKCWRCDPQW
ADNREKYADCAMGFGSKATGGKGGRVYVVSDNSDSDVENPAPGTLRHAVIQTEPLWIIFE
RHMHIKLQRELLMQGHKTIDGRGFNIHIEKGAGLKMQGVSNVIISNLHVHNIVITPGGMI
RDSAEHVGIRSEDEGDGISLFSATDIWIDHVSMSRATDGLIDAVKGSTGITISNCHFTDH
DKVMLFGANDNHVEDKKMQITLAYNHFGKRLDQRMPRVRFGFFHIVNNDYTHWMRYAIGG
NNGATIISQGNRFIAQASPLIKEVTHREKVEESEWKNWTWLSIDDDMQNGAFFKTSGDQD
ALSKLQDLNLIPAEPSYKVGIITKFAGSLACTAGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttctaaaacaagaaccaatgtggctcttgttgtgttgttggtaacatgtttg
actgtaggggcagcagttgcagcagacaacagcacaagaaggcacttggctaaaaaatac
aaaggaccatgtatggccactaatcttattgacaaatgctggagatgcgacccgcaatgg
gctgataatcgcgaaaaatatgctgattgtgcaatgggcttcggtagcaaggctactggt
ggtaaaggtggacgtgtttacgttgtctcagataattctgacagtgatgttgagaatcct
gcacctggtacccttaggcacgcggtgatccaaacagagccattgtggatcatattcgaa
agacatatgcatattaagctacagagggaactcctgatgcaaggtcacaaaacaatcgat
ggacgtggattcaacattcatatcgaaaaaggagctggacttaagatgcaaggtgtgagc
aacgttatcatctcaaatcttcacgttcacaacattgtaataactcctgggggtatgatc
agggattcagcagagcacgttggcataagaagtgaggatgaaggtgatggcatcagtctg
ttttcggccacagatatctggattgaccacgtatccatgtcacgcgccacagatgggctc
attgatgccgttaaaggatcaaccggtatcaccatctccaactgtcatttcaccgatcac
gataaagtaatgttgtttggtgctaatgacaatcacgtcgaagacaagaaaatgcagatt
acattggcctataaccatttcggtaaaagattagatcagaggatgcctagagtcagattc
ggattcttccatattgtcaacaatgattacactcattggatgaggtatgctattggtgga
aacaatggagcaacaattataagtcaaggtaatcgctttatcgcacaagcaagtcctttg
attaaagaagtgacacatagggaaaaagtagaagaatcagaatggaagaattggacttgg
ctatccatagatgacgatatgcaaaatggtgcgttttttaaaacatctggtgatcaagat
gcactaagcaaattacaggatttaaatttgataccagcagagccatcatataaagttgga
attattacaaagtttgctggatcacttgcttgcacagcaggacgcccatgctag
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