Solanum lycopersicum (tomato): 101265370
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Entry
101265370 CDS
T02665
Name
(RefSeq) syntaxin-43
KO
K08489
syntaxin 16
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101265370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101265370
Membrane trafficking [BR:
sly04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
101265370
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
FlxA
Use1
EF-G-binding_N
LYRM_2
GCP_C_terminal
OmpH
MCPsignal
ZSWIM1-3_C
EFL1
Motif
Other DBs
NCBI-GeneID:
101265370
NCBI-ProteinID:
XP_004230277
UniProt:
A0A3Q7F8H7
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Position
1:86115985..86121255
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AA seq
324 aa
AA seq
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MASRNRTLVFRKYRDALRSVRIPAGSSTSTSSGHGSGPVIELATTSLLNPNRSYAPLSTE
DPGTSSNGPVTVGLPPAWVDLSDEITANVHRVRTKMSELAKAHAKALMPSFGDGKEDQRR
IEALTHEITDLLKRSEKKLQRLSAAGLSEDSNVRKNVQRSLATDLQSLSMELRRKQSTYL
KRLQQQKEGPDGVDLEMNLNGSHSRRDDDDLDDLGFNEHQMAKLKKSEAFTVEREREIQQ
VVESVNDLAQIMKDLSVLVIDQGTIVDRIDHNIQNVASTVEDGLKQLKKAERSQKRGGMV
MCATVLVIMCFIMLVLLILKEIIF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaaatagaacgcttgtgtttaggaagtatagagatgcgttgagaagtgtt
cggatcccggcgggctcttcgacgtccacgtcatccggacatggtagtgggccggtgatc
gaattggcaacgacttctttgcttaatcctaatcgatcttatgctcctctcagtacggaa
gaccccggaacctccagtaatggaccagttacagtaggtctaccgccagcttgggtggac
ttgtcagatgaaatcacggctaatgttcatcgggtccggacaaagatgtctgaactagcc
aaagctcatgctaaggctttaatgccatcatttggagatggtaaggaagatcaacgtcgt
attgaggctcttacccatgaaataactgatcttctcaaaagatcagaaaagaaattacaa
agactttctgcagctgggctttccgaggattcaaatgtcaggaaaaatgtacagcgctct
cttgctacagatcttcaaagcctatcaatggagcttcgcagaaaacagtctacttatttg
aagaggcttcagcagcagaaagagggtccagatggagttgacttggagatgaacttaaat
gggagccattctagaagggatgacgatgatttggatgacttgggatttaatgagcatcag
atggccaagctaaagaaaagtgaggcattcactgttgaaagagagagagaaatacagcag
gtggttgaatcagtgaacgaccttgcccaaattatgaaagatctatcagttctggtgata
gaccagggtactatcgtcgataggatagaccacaatattcaaaatgttgcatcaacagtt
gaggacggccttaaacaactaaagaaggctgaacgaagtcagaagcgaggtggaatggtc
atgtgtgcaacagttctagttatcatgtgctttataatgctagtcctattaattttgaag
gagataatattctga
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