Solanum lycopersicum (tomato): 101265393
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Entry
101265393 CDS
T02665
Name
(RefSeq) ras-related protein RHN1
KO
K07887
Ras-related protein Rab-5A
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
sly04145
Phagosome
sly04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101265393
04145 Phagosome
101265393
04148 Efferocytosis
101265393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101265393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101265393
04031 GTP-binding proteins [BR:
sly04031
]
101265393
Membrane trafficking [BR:
sly04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
101265393
Endosome - Lysosome transport
101265393
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101265393
Exosomal proteins of other body fluids (saliva and urine)
101265393
Exosomal proteins of colorectal cancer cells
101265393
Exosomal proteins of bladder cancer cells
101265393
GTP-binding proteins [BR:
sly04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
101265393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
101265393
NCBI-ProteinID:
XP_004232667
UniProt:
A0A3Q7FSQ8
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All DBs
Position
2:complement(61561236..61565841)
Genome browser
AA seq
200 aa
AA seq
DB search
MASTGHTNLNAKLVLLGDMGAGKSSLVIRFIKGQFLEFQESTIGAAFFSSTLAVNNATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFAKAKKWVQELQKQGNSNMIMAL
AGNKADLEDRRNVPAEEARLYAEENGLFFMETSAKTAANVNDIFYEIAKRLPTAQPTQNP
AGMVLENRPAEGSRTASCCT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactgggcacaccaatctgaatgcaaaacttgtattgttaggtgacatggga
gctggtaaatcaagcttggttatacgattcataaagggccaattccttgaatttcaagaa
tcgacgattggggcggctttcttttcgtctacattggcagttaataatgctacggtgaag
tttgagatatgggatactgctgggcaggagaggtaccatagcttagcacctatgtattat
agaggcgctgcagctgctattattgtctatgatatcactagctcggattcatttgcaaag
gcaaagaaatgggtgcaagaattgcagaagcaaggtaattctaacatgatcatggctctt
gctggcaataaggcagatctagaagatcgaaggaacgttcctgcagaggaggcacgcttg
tatgcagaggaaaatggcctctttttcatggagacctctgccaaaactgctgcgaatgtc
aatgatattttctatgaaatagctaaacggttgcctacagctcaacccactcaaaatcca
gcaggaatggttcttgaaaacagaccagcagaaggatctcgaactgcatcatgttgtact
tga
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