Solanum lycopersicum (tomato): 101265585
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Entry
101265585 CDS
T02665
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101265585
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101265585
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Helicases
101265585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101265585
NCBI-ProteinID:
XP_004247775
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All DBs
Position
9:complement(67649068..67658587)
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AA seq
799 aa
AA seq
DB search
MASQISDKKRTKKTKKRSRVESEEFERINSLNWNPTLTEKDDAFSFLIGSNELEGGFLCL
EEIDESEYNLGIAKSSGGSEEKGKTKPKKQKVDTKNEELNGEAKGESKEEIEEVEKETKQ
KKKKKMKKKKKDKINKDAVNEAEGNEEPPAVTDGNDDQEQDSVDETEYYAWNELRLHPLL
MKSIYALKFKEPTPIQQACIPAGSHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREKAE
RQLPENGELDDKVASAGLLRALIITPTRELALQVTDHLKEAAKHSNFRVVPIVGGMSSEK
QERLLKTRPEIVVGTPGRLWELMSGGETHLVELHSLSFFVLDEADRMIENGHFHELQSIV
DMLPMANKSTDDDSQKSQNCETVSSVQRKKRQTFVFSATIALSADFRKKLKRGSQKSKAN
DELNSIETLSERAGMRADAAIIDLTNASILANKLEESFIDCRDEDKDGYLYYILSVHGQG
RTIVFCTSIAALRHISSLLRILGVNVWTLHAQMQQRARLKAIDRFRGHEHGILIATDVAA
RGLDIPGVRTVIHYQLPHSAEVYVHRSGRTARAHSDGCSIALITPNDTSKFAALCRSFSK
DNFQRFPLEMSYMPEVMKRLSLARQIDKISRKDSQDKAKKNWLERSAELMELDLEDNDSE
EERVNNHKRKKATSAQLTNLQEELKSLLSRPLQPKTFSKRYLAGAGVSPLLQNQLEELAR
QKNSNNSGDVKRKKMIVIGQDCVEPLQALRSAGPETKLNLKDMAEKRRDITELRRKRRET
KKRLREQRRKQKKKLQGKE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaatttcagataaaaagagaacaaagaaaacaaagaaacgaagcagagtt
gaatcagaagaatttgagcgaatcaactcacttaattggaatccaacacttacagagaaa
gatgatgccttctctttccttattggctcgaatgagcttgaaggaggttttttatgtctt
gaagagatcgatgaatcagagtacaatttgggtattgccaaatcatctggtggaagtgaa
gaaaaggggaagacaaaaccgaagaaacagaaagtagatacaaaaaatgaggaattgaat
ggtgaagctaagggtgagagcaaagaggagattgaagaggtggaaaaggaaacgaaacaa
aagaagaaaaagaagatgaagaagaagaagaaagataagatcaataaagatgctgtaaat
gaagctgaaggaaatgaagagccgccagctgtcactgatggaaatgatgaccaagaacaa
gattcagtagatgaaactgaatattatgcatggaatgaactgagacttcatccactgctc
atgaaatcgatatacgcgctcaagttcaaagaacctacaccaatacaacaagcgtgcatt
cctgcaggttctcaccaaggaaaggatgttgtgggtgctgcagagacaggttctgggaaa
acactggcatttggtctgcccattcttcaacgtctgcttgaggagcgagaaaaggccgaa
aggcagcttccagaaaatggagaattggatgataaagttgcctccgcaggtctcctccgc
gctctaattattactcctacaagagagcttgcccttcaggtcactgatcatctgaaggaa
gcagcaaaacattcaaattttagggttgtccctattgttggtggaatgtcaagtgaaaaa
caagaaagacttttgaaaacaaggcctgaaattgttgtcggaactccggggaggctttgg
gagcttatgtctggtggtgaaactcatctcgtggagttgcactcactgtcattttttgtg
ctggatgaggccgatcggatgatagaaaatggccatttccacgagttgcagtctatagtt
gacatgcttcctatggctaataaatcgactgatgacgattctcagaaatcacaaaattgt
gaaacagtttccagtgtccaaagaaagaaaaggcaaacatttgtgttttctgcaaccatt
gctttgtctgccgatttcaggaagaagctaaagcgtggatcacaaaaatcaaaagcaaac
gatgagttgaattcaatagaaactctgtctgagagagcaggaatgagggcagatgcggca
atcattgatctgactaatgcatcaattctagccaacaagctcgaggagtcgtttatagac
tgcagggatgaagataaagatgggtatttgtattacattttgagtgttcatggacaaggt
cggacaattgtcttctgtacgtccattgcagctttacgccatatctcctccctcttgcgc
atccttggcgtcaatgtctggacacttcatgcccagatgcaacagagagctcgacttaag
gcaattgaccggtttcggggacatgagcatggtatactcattgctacagatgttgcagcc
agaggtttggatattcctggtgttcgaaccgtcattcactatcagctacctcattcagct
gaagtttacgttcatagaagtggaagaactgctagggctcattctgatggatgtagcatt
gctctaatcacaccaaatgatacctcaaagtttgctgctttatgcaggtcgttttcaaag
gataacttccagcggtttcccttagaaatgtcatacatgcctgaagttatgaagcgatta
tcccttgcacgtcaaatagacaagatttcccgaaaggactctcaggacaaggccaagaaa
aattggcttgagcgaagtgctgaattaatggaactagatttggaagataatgatagtgag
gaggaaagagtgaacaatcataagcgaaagaaagccacatctgctcaactaactaatcta
caagaggaactaaaaagtcttctttcacggccattgcaacccaaaacattctcaaaacgc
tacttggctggggctggtgtttcacctctccttcagaaccagctggaggaattagctaga
cagaaaaattcaaataattccggagatgttaaaaggaagaaaatgatcgtcattggtcag
gattgtgtcgagcccctccaggcacttaggagtgctggtccagagactaagttgaatctg
aaggatatggctgaaaaacggagagatataaccgagttaaggagaaagaggagagaaacc
aaaaaacgtttgcgcgaacaacgacgaaaacagaagaaaaaacttcaaggaaaagagtga
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