Solanum lycopersicum (tomato): 101265610
Help
Entry
101265610 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K23288
syndetin
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101265610
Membrane trafficking [BR:
sly04131
]
Protein recycling
Others
EARP complex
101265610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101265610
NCBI-ProteinID:
XP_004250992
LinkDB
All DBs
Position
11:complement(57688103..57717378)
Genome browser
AA seq
1092 aa
AA seq
DB search
MQSNSSPPFPLIPLVLFNGGQLSEGGFELSRFLFLGSLLFSQGGDDGMDLSKVGEKILSS
VRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRYTLSSSSEELSSIYGSKPP
DQVVEELEEEFYEEEFDPVGHILEHMPSEESELAYLEDQATLRLSQLDRISERLSRHVME
HHEVMVKGMDLVRQLERDLKIANVICMNGRRYLTSSRNEVSRDLIVSNNSKRKQALLDVL
PVLTELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQLLDTLSELSAAQEMSRGVEVWLG
KTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEVLSETHSALKT
TVQEDLDNNNVNSSRLTYSDLCTQIPESKFRQCLLATLAVLFRLMCSYHAIQSFQPEDKE
DISSPSTERAPTLASVEDPPTTSVASSDTAMHGSSNINYRVEEARDDGSTASSSGSPWFQ
LRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSASIHQFLTTYEDLNIFVLAGE
AFCGSEAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEREHWLILPPETIEVVSFAGLVG
DGAALIVSSETSPNTRLLQERKPVHPIQTKSSKRNGFSSWLKGGNPFLPKLNGSSRENLE
SCLPNGSAMQESGNSNEDSLDKSSLRNSDVNHVNGNTTLSEDENEDLHADFIDEDSQLPS
RISKPGHSKSRSSHWNNEQIKEQTGSSLSLLRSLDKYARLMQKLEIVTVEFFKGFCQLFG
IFFHFVFETFGHQSIHPSGKAVTDTLSHRLKTALLRITHDCDQWMKPQSQSFSSSSPSSS
STSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARVLHRSKAHLQSLLQNNAALV
EDFYVHLVDVVPDLVDHIHRTTARLLLHINGYIDRIANAKWEVKELGVEHNGYVDLLLGE
FKHYKTRLAHGGIRKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMSLDLQVLIN
GLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWSRAHPEYSKSQIVGLINLVSTMKGWK
RKTRLEVLEKIE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattcttctccgccttttcctttgattccacttgttctcttcaatggcggt
caattgagcgaaggtgggtttgaattatctaggtttttgtttttggggtctttgctcttc
tctcaaggaggcgacgacggtatggacttgtctaaagttggagagaagattttgagttcc
gttcgttctgctagatctcttggtcttctcccttcttcttctgatcgtccggaggttcct
gaacgagctgcagctgctgctgcacttgcacgtgttctagctggactacctcctcatcag
agatacactctttcatcaagctcggaagaactgagctcaatatatgggagcaaacctcct
gatcaagttgttgaggagctggaggaagaattctatgaagaggaatttgatcctgtcgga
catattctggagcatatgccatctgaagagagtgaattagcttacttggaagatcaggcc
actcttagattatcacagctggacagaatttctgagcgcttgtctcggcatgttatggag
catcatgaagtaatggtgaagggaatggatcttgtgagacaactagaaagagacttgaag
attgcgaatgtcatttgcatgaatggtcgccggtatttaacctcttcaaggaatgaggtt
tcaagggatctcattgtctccaacaattctaaaagaaaacaagcactcttggatgttctt
cctgtcctgactgagctacgccatgcactagacatgcaatcaacacttgaaactcttgtc
gaggaaggaagattctcaaaggcattccaagtactatctgaatatttacaacttttggat
acactgtcagagctttctgccgcacaagagatgagccgtggtgttgaggtttggttaggg
aaaactcttcaaaagctggattcacttctattaggagtgtgccaggatttcaaggaggag
aactatgtaactgtagttgatgcttatgcactaattggagatgtcgctggccttgctgag
aagatacaaagtttctttatgcaggaggttctatctgaaacccactcagcgctgaagact
actgtacaagaggatctggataacaacaatgtgaacagttctaggctcacgtatagtgat
ctgtgcactcagatacctgaatccaagttcaggcaatgcttgctagcaacattagctgta
ctttttaggttgatgtgttcatatcatgcaatacagagcttccagcccgaggataaggaa
gatatttcgtcaccaagcacagagagagcgccaactttagcatctgttgaagacccacca
actacttctgttgcttcatccgacactgccatgcacggttcatccaacataaattatagg
gttgaagaggcaagggatgatggaagtacagcatcaagcagtggatccccctggtttcag
ctgaggaaagatgctacgacctttgtttcacatacattacttagaggtcgaaagaatctt
tggcaacttacaacaagtcgtgcagctgtcttgctttcttcaccggctattcattcagct
agcatccatcaattcttaacaacttatgaagatttaaacatttttgtgctggctggggaa
gctttttgtggaagtgaagcagttgagttcaggcagaaagtgaaatctgtttgtgaaagt
tatttagctgctttccatcggcaaaatatatatgctctcaagatggtgctggaaagggag
cattggctgatattgccgccagagacgatcgaagtagtaagcttcgctgggcttgtcggt
gatggagcagctttgatagtttcatctgagacctctccgaatactcgactgctgcaagaa
cgcaagcctgtacatcctatccaaactaaatcctctaagagaaatggattttcaagttgg
cttaagggtggaaatccatttctgccaaaactaaatggtagttccagggaaaacttggag
tcttgtttgcctaatggatctgcaatgcaagaaagtggaaactccaatgaagattctttg
gataagagttctttgagaaacagtgatgtaaatcatgtcaatgggaatactactttatca
gaagatgaaaatgaagatcttcatgctgattttattgatgaagatagccaactacctagc
cggatttctaaacctggtcattcaaaaagtcgttcttcacattggaacaatgaacaaata
aaagagcaaacaggatcatcacttagcctcctgaggtcactggataaatatgcaaggttg
atgcagaagttagagattgttactgttgagttttttaagggattttgccaattgtttggg
atcttctttcacttcgtctttgagacctttggtcaccaaagtattcatccaagtggaaag
gctgtgactgacacgctgtcgcatagactgaagactgcattattacgaataacacacgat
tgtgaccaatggatgaaaccccagtctcaatcattttcttcctcttctccctcaagctca
agtacatcattttctcacatggatgtcactcctaccagcccaccaagttacttaactggt
gcatccctgggactgaaggaaagatgtgcaggtgctgacactatatatgttgttgctcgg
gtattacatagatctaaagcgcatcttcagtcactgcttcagaataatgcagcactggtt
gaggatttctatgtgcatttggtggatgttgtaccggaccttgttgatcatattcataga
acaactgctagattacttctccacataaatgggtatattgatcggattgccaatgctaaa
tgggaggtgaaagagcttggagtagagcacaatggatatgtagatcttttgcttggagaa
tttaagcattataaaacaaggcttgctcatggaggaattcggaaggaggtccaagacctc
ctcttagaatacggagtagataatgtggctgaaattctcgttgaaggcctatcccgggtg
aagaggtgtactgatgaaggacgagctcttatgtcattagatcttcaggtattgataaat
ggcttgaagcatttcatttctgtagacgtgagacctaaactacagatagttgaaacattc
atcaaggcctactatcttccagaaaccgaatttgtgcactggtcacgtgctcatccggaa
tacagtaaaagtcaaattgttggtctaatcaacctagtctctacaatgaaaggctggaag
aggaaaaccaggttggaagtactggaaaagattgagtga
DBGET
integrated database retrieval system
