Solanum lycopersicum (tomato): 101265626
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Entry
101265626 CDS
T02665
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101265626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101265626
03110 Chaperones and folding catalysts [BR:
sly03110
]
101265626
03029 Mitochondrial biogenesis [BR:
sly03029
]
101265626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101265626
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101265626
Messenger RNA biogenesis [BR:
sly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101265626
Chaperones and folding catalysts [BR:
sly03110
]
Heat shock proteins
HSP60 / Chaperonin
101265626
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101265626
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101265626
Exosomal proteins of other body fluids (saliva and urine)
101265626
Exosomal proteins of breast cancer cells
101265626
Exosomal proteins of colorectal cancer cells
101265626
Exosomal proteins of bladder cancer cells
101265626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101265626
NCBI-ProteinID:
XP_004235594
UniProt:
A0A3Q7FVS7
LinkDB
All DBs
Position
3:66570192..66577826
Genome browser
AA seq
573 aa
AA seq
DB search
MFRAAAAVASSIRSSTSRKLVSSRIISSRNYAAKDISFGSHARLAMLQGVNELAEAVKVT
MGPKGRNVIIEKSPGNPKVTKDGVTVAKSINFKEKAKNVGADLVKQVANATNSVAGDGTT
CATVLTQAIFTEGCKAVAAGVSVMDLRNGINMAIDAVVADLKSRAVMISTPEEITQVGTI
SANGEREIGEIIARAMEKVGKEGVITVADGNTLDNDLEVVEGMKLGRGYISPYFVTDEKT
QKCELENPLILIHDKKISDLNSLVRILELALKRRSPLLIVAEDVESDALAMLILNKHRAG
IKVCAIKAPGFGDNRRANLEDLAVLTGGEVISEERGLDLSKVQFDMLGTAKKVTVSLDDT
LVLHGGGDKKLIEERCEQLRIAKEKSSAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKCLKGLQTANDGQKRGVEIIENALKAP
TFTIASNAGADGALVVGKLLEQDDLNLGYNAAKGTYLHMVKAGIIDPVKVVRTALVDAAS
VSLLLTTAEAAIVDRQGEENPLANRMPNMGGMY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagctgctgcagctgttgcttcatcaatcaggtcctcaacttccaggaaattg
gtttctagtaggattatttctagcagaaattatgctgccaaggatatcagttttggtagc
cacgcacggttagctatgctgcagggggttaatgagcttgcagaagctgtaaaagtcact
atgggaccaaagggacgtaacgtgattatagagaaaagccctgggaatcccaaggtcaca
aaggatggtgtcactgtagccaaaagcatcaactttaaggaaaaggcaaagaatgtgggc
gctgatcttgtgaagcaggttgctaatgctactaattcagttgctggagatggtaccacc
tgtgcaactgtgcttactcaggcaattttcacagaaggttgcaaagctgttgctgcaggt
gtgagcgtgatggatttgcgtaatggtattaacatggccattgatgctgttgttgctgac
ttgaagagcagagcagtcatgattagcaccccggaggagattacacaggtgggtactata
tctgcaaatggtgaacgtgaaattggggaaataattgctcgagccatggaaaaagttggg
aaggaaggagttattactgttgcggatgggaataccttggataatgatttggaagtggtg
gaaggaatgaagcttggccgaggttatatatctccttattttgtcacggacgaaaagact
caaaaatgtgaattggaaaatccgttgatccttattcatgacaagaaaatctcagatttg
aactcgcttgtgcggatattggagcttgctcttaagagaaggagtcctctgttaatcgtt
gctgaagatgtggaaagtgatgcattagctatgcttatcctaaacaagcatcgtgctggg
attaaggtatgtgccattaaagctcctggttttggggataatagaagagccaacttggag
gacctagcagttcttactggaggagaggtcattagtgaagaacgtggtttggatctgagc
aaagttcaatttgatatgcttggtactgccaaaaaggttactgtttcccttgatgacacc
ctagttctgcatggaggtggggacaaaaagctaattgaagaaaggtgtgagcagctaagg
atagctaaagaaaaaagtagtgccatgtttgataaggagaaagctcaagagcgtttgtca
aagctatctggtggtgttgctgttttcaaggtcggtggggccagtgaggcggaggttggg
gaaaggaaagatagggttacagatgccttaaatgcaacaagggctgctgtggaagagggc
attgttccaggtggtggtgttgctctcttatatgcaaccaaatgtctaaaaggccttcag
actgcaaatgatggccaaaaaaggggagttgagatcattgagaatgctctaaaggcacct
acttttacaatagcttcaaatgctggtgcagacggtgccttggttgtaggcaagctctta
gaacaagatgatctgaatctaggatataatgcagccaaaggtacgtacctacacatggtg
aaggctggaattattgatcccgtgaaggtagttagaacagcattagtggatgctgccagc
gtctctttattattgacgacagctgaggctgccattgtggaccgtcaaggagaggaaaac
ccactcgcaaaccgtatgccaaacatgggcggtatgtactaa
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