Solanum lycopersicum (tomato): 101265895
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Entry
101265895 CDS
T02665
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101265895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101265895
Ion channels [BR:
sly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101265895
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101265895
NCBI-ProteinID:
XP_004251491
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Position
12:complement(633705..640059)
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AA seq
686 aa
AA seq
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MASHHELELSNNYSDRSDDDMDEDEDEQDNIEEEEKEDDNSNDYNICSSRSRGGGLTDFF
SWKVIDPRAPWVQEWNRVFLLVCATGLFVDPLFFYSLSISETCMCLFIDGWFAVTVTVLR
CMTDAMHLWNMWIRFKMHKLRPYNEKMDENQITSSSRGPRLHQDQSFRCFVALRYLKSKK
GFFLDLFVILPLPQIVMWVGIPGLLEKGYTTTVMTVLLIMFLFQYLPKIYHSVCLLRRMQ
NLSGYIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRAAKCLKQQCRVTNGCSLRMLA
CEEKIFYGTSSLVKHRSRVIWGESKIARSTCLASEHNFDYGVYKWTVQLVTNENRFEKIL
FPIFWGLMTLSTFGNLESTTDWLEDVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAM
QLKMRNVEWWMRRRRLPQGYKQRVRNYERHRFAATRGVDEYEMISNLPEGLRRDIKYHLC
LDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQEL
RDGVKSCCMLGPGNFSGDELLSWCLRKPFVERLPPSSSSLVTLETTEAFGLEADDVKYVT
QHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRSS
SLTEDRLRLYTALLTSPKPNQDDFDF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcatcatgaacttgaactatcaaataattatagtgatcgaagtgacgatgac
atggacgaggacgaggatgagcaagataacatagaagaggaggaaaaagaagatgataat
tcaaatgactacaacatttgtagtagtcgtagtcgaggaggaggattgacagacttcttt
tcgtggaaagtcatagaccctagagcgccttgggttcaagaatggaatcgagtattttta
ttagtatgtgccacggggctatttgtggatcctctctttttctactctctctctatcagc
gagacttgcatgtgcctttttatcgatggttggtttgcggtaacggtcaccgttcttcga
tgcatgaccgatgcgatgcatttatggaacatgtggatacgattcaagatgcataaatta
cgtccttacaatgaaaaaatggatgaaaatcaaattactagtagtagtcgaggtccacga
ctacatcaagaccagagttttcgatgttttgtggccttacgatacttgaaatccaagaag
ggtttctttttggatctctttgtcatccttcctttacctcagatagtgatgtgggtaggg
attccaggtttactggagaaaggatatacaacaacagtaatgacagtattattaataatg
tttctgtttcaatatctgcccaaaatttatcactcagtttgcctgctaagacgcatgcag
aatctctctggatacatttttggtactgtttggtggggaattgctcttaacttgattgct
tattttgttgcctcccatgcagtgggagcatgttggtacttgctaggaatccaaagggca
gcaaaatgtttgaaacaacagtgtagagttacaaatggttgtagcctaagaatgttggca
tgtgaagagaaaatattttatggaacaagtagtttggtgaagcatagaagtagagtcata
tggggtgagtccaaaattgcaagatcaacatgtctagcctctgaacacaattttgattat
ggagtttataaatggactgttcaacttgtcacaaatgagaatcgttttgagaaaatatta
tttcccatcttctggggtctcatgactctcagtacatttggaaacttggagagcacaaca
gattggctggaagatgtattcataatcattgttctcactactggtcttcttcttgtcact
atgttgattggtaatatcaaggtattcttgcatgcaacaacatcaaagaaacaagcaatg
caactaaaaatgagaaatgtagaatggtggatgaggagaagaaggttgcctcaaggatac
aagcaaagggtcagaaattatgaaaggcatagatttgcagcaacaagaggagttgatgaa
tatgagatgataagcaaccttcctgagggacttagaagagacatcaaatatcatctttgt
ttggacttggttagacaggttcctttgtttcaacatatggataatttggtcctggagaac
atatgtgaccgcgtaaaatccttgattttcactaaaggagaaacaataacaagagaaggt
gatccagttcaaagaatgttgttcatagtgagaggtcatctccaaagcagtcaagaactt
agagatggtgtcaaaagttgttgcatgttgggccctggaaacttcagcggcgacgaactt
ctctcatggtgcctccggaaacccttcgtggagcgtctaccgccttcctcctcatcgcta
gtgactctcgagaccacagaagcgtttggcctcgaagcagatgatgtcaagtatgtcact
caacatttccgctacacatttgtgaatgagaaagtgaagagaagcgccagatattattct
ccaggatggcgaacttgggctgccgttgctattcagttggcctggaggagatatagacac
cggctgactctcacgtcgttgtccttcattcgaccaagacgaccgttgtctcgatcttct
tcattaacagaagacagactcaggctatatacagctttgctcacttcaccaaagcctaat
caggacgattttgatttttaa
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