Solanum lycopersicum (tomato): 101265987
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Entry
101265987 CDS
T02665
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101265987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101265987
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
101265987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
101265987
NCBI-ProteinID:
XP_004232510
UniProt:
A0A3Q7F8T6
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Position
2:63138624..63148096
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AA seq
790 aa
AA seq
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MITNGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEIFFREETNRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRSIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGHAREKEKREKERSELRDLVGKNLHVLGQIEGIDLDLYKDMVLP
RVLEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACPQFQPSVDIKTVLARLME
RLSNYAALSAEVLPEFFQVEAFAKLNSAIGKVIEAQEDMPIAGVVTLYSSLLTFSLHVHP
DRLDYVDQILGACVQKLSGKGKLKDNKATKQIVALLSAPLEKYKDIDTALKLSNYPRLME
NLDDSTSKEMANVLVQNILKNKTCISTAEKVEALFELMKALIRDLDEGVDDELDEDDFQE
EQNSVAQLIQMLHNDDPEEMLKIICAVKKHILTGGPKRLPFTVPPLIFNSLKFVRRLHSH
DENVPEEESSAMPKKFFQILNQIIEALSIVPVPELALKLYLECAEAANDSDIEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHIFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVLLFIEILN
KYLYFFEKGVSQINVASVQSLIELITTEMQSENTTADPAADAFFASTLRYIQFQKDKGGA
VGEKFESINS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgataactaatggagtcgaagacgaagagaagtggcttgccgctgggatcgccggcctt
cagcagaacgcattttacatgcatcgcgctcttgactcgaacaatctgaaagatgcattg
aaatactcggctcagatgctctcggagctccgaacttccaagctttctcctcacaaatac
tatgaactatatatgcgcgcatttgatgaattgaggaaattagagatcttcttcagagag
gagacaaatcgtggctgctccattgttgagttgtatgagctcgtgcagcacgctggcaac
attttgcctagattgtatctcctttgtacagtgggttcagtgtacattaaatcaaaggag
gctcctgccaaggatattctcaaagatctggtggaaatgtgccgtagcatacaacatcca
ttacgtggtctcttcctaaggagttacctttcacaagtcagtagggataaattgcctgat
ataggatctgaatatgaaggggatgctgacactgtcatggatgcagtagaattcgtgctc
caaaatttcacagaaatgaacaaactttgggtgcgaatgcaacatcagggacatgcacgg
gaaaaggaaaaacgtgaaaaagaaaggagcgagcttcgcgatcttgtggggaagaacctg
catgttctaggtcaaattgagggcattgaccttgatttgtacaaagatatggtgcttcca
agagttttagagcaggttgtcaattgtaaagatgagattgcacagggatatttgatggat
tgcatcattcaagtcttccctgatgagtaccacttacaaactcttgaaacattacttggt
gcttgcccccagtttcagccatctgttgatatcaagacagtgcttgctcgtctgatggaa
aggctttcgaactatgctgctttaagtgcagaagttttacctgagttcttccaggttgaa
gctttcgcaaaacttaatagtgccataggcaaggtgatagaggctcaagaagacatgcct
attgccggagtggtgacattgtattcatcccttttgacattttctcttcatgtccaccct
gatcgccttgattatgtagatcagattctgggtgcatgtgtacagaaactttctggaaaa
ggaaagctcaaagacaacaaagcaacaaaacagatagtggccctactaagtgctcctctg
gagaagtataaggatatagatactgcgctaaagctgtcaaattatcctcgtcttatggag
aatcttgacgattcaactagtaaagagatggctaatgttttagtacaaaatattttgaaa
aataagacttgcatttcaactgctgaaaaggttgaggcactttttgagttaatgaaagca
ctaattcgagatttggatgagggtgttgatgatgagcttgatgaagatgatttccaggaa
gagcagaattctgttgcgcagcttattcaaatgcttcacaatgatgatcctgaagagatg
ctgaagattatttgtgctgtgaagaagcacattttgacaggagggccaaagagacttcct
tttactgtccctccccttattttcaactcactaaagtttgttaggcgactacatagtcat
gatgaaaatgttcctgaggaagagtcatctgctatgcctaagaaattctttcagattctg
aatcagattattgaggcgctctcaattgttcctgtacctgaactagcactgaagctgtac
ctggagtgtgctgaggctgccaatgactctgacatagagcctgttgcctatgaatttttc
actcaagcttatatactatatgaagaagaaatttcggactccaaagcacaggtgactgca
atacacttgataataggaactcttcagagaatgcacatctttggtgttgagaacagggac
acgttaacgcacaaggctacagggtactctgcaaagctcttgaagaaacctgatcaatgt
agagctgtgtatgcttgttcgcatcttttctgggttgacgatcaggacaatatcaaggat
ggagaaagggttttgctttgcttaaagcgggccttaagaattgcaaatgctgctcaacaa
atgtccaatgcaacccgaggcagcagtggatctgtcttgctctttatagaaattctaaac
aagtatctgtatttctttgagaagggggtctcacaaattaatgttgcctccgtccagagc
ctgattgagctaatcacaactgaaatgcaaagtgaaaatacaacagcagatcctgcagca
gatgccttctttgcaagcaccttgcgatacatccagttccagaaggataaaggtggtgca
gttggggagaaattcgagtccatcaactcataa
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